RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
CLSTN3-209ENST00000539982 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
CLSTN3-209ENST00000539982 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
CLSTN3-209ENST00000539982 HIST1H2BLQ99880 126 aa6.97□□□□□ -1.29
CLSTN3-209ENST00000539982 COX7A2LO14548 114 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 TCAPO15273 167 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 FABP4P15090 132 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 ORMDL2Q53FV1 153 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 KRTAP11-1Q8IUC1 163 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 OPRPNQ99935 248 aaPredicted RBP6.96□□□□□ -1.3
CLSTN3-209ENST00000539982 HBDP02042 147 aa6.95□□□□□ -1.3
CLSTN3-209ENST00000539982 FCER1GP30273 86 aa6.95□□□□□ -1.3
CLSTN3-209ENST00000539982 TSHBP01222 138 aa6.94□□□□□ -1.3
CLSTN3-209ENST00000539982 G0S2P27469 103 aa6.94□□□□□ -1.3
CLSTN3-209ENST00000539982 A0A096LNJ9 63 aa6.93□□□□□ -1.3
CLSTN3-209ENST00000539982 LEPROTL1O95214 131 aa6.93□□□□□ -1.3
CLSTN3-209ENST00000539982 AKR1D1P51857 326 aa6.93□□□□□ -1.3
CLSTN3-209ENST00000539982 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
CLSTN3-209ENST00000539982 HSPB8Q9UJY1 196 aa6.93□□□□□ -1.3
CLSTN3-209ENST00000539982 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
CLSTN3-209ENST00000539982 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
CLSTN3-209ENST00000539982 TSPAN13O95857 204 aa6.91□□□□□ -1.3
CLSTN3-209ENST00000539982 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
CLSTN3-209ENST00000539982 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
CLSTN3-209ENST00000539982 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
CLSTN3-209ENST00000539982 F8WDY8 70 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 ATP5LO75964 103 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 KRTDAPP60985 99 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
CLSTN3-209ENST00000539982 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 IFI27L1Q96BM0 104 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 SCGB3A1Q96QR1 104 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
CLSTN3-209ENST00000539982 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
CLSTN3-209ENST00000539982 UBE2BP63146 152 aa6.88□□□□□ -1.31
CLSTN3-209ENST00000539982 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
CLSTN3-209ENST00000539982 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
CLSTN3-209ENST00000539982 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 NDUFA1O15239 70 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 ERASQ7Z444 233 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
CLSTN3-209ENST00000539982 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 M0QXV9 152 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 ZNF861PO60384 105 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 GAGE2EQ4V326 116 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 PET117Q6UWS5 81 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 GAGE2DQ9UEU5 116 aa6.86□□□□□ -1.31
CLSTN3-209ENST00000539982 C20orf202A1L168 122 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 SCGB1D1O95968 90 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 NPSP0C0P6 89 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 Q6ZN92 141 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 PYGO1Q9Y3Y4 419 aa6.85□□□□□ -1.31
CLSTN3-209ENST00000539982 H0Y8G0 127 aa6.84□□□□□ -1.31
CLSTN3-209ENST00000539982 TRAV12-1A0A0B4J245 112 aa6.83□□□□□ -1.32
CLSTN3-209ENST00000539982 IGHV3OR16-9A0A0B4J2B5 98 aa6.83□□□□□ -1.32
CLSTN3-209ENST00000539982 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
CLSTN3-209ENST00000539982 LINC01545Q5VT33 79 aa6.83□□□□□ -1.32
CLSTN3-209ENST00000539982 Q6ZUT4 128 aa6.83□□□□□ -1.32
CLSTN3-209ENST00000539982 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
CLSTN3-209ENST00000539982 A0A087X002 238 aa6.82□□□□□ -1.32
CLSTN3-209ENST00000539982 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
CLSTN3-209ENST00000539982 PMVKQ15126 192 aa6.82□□□□□ -1.32
CLSTN3-209ENST00000539982 TYMSOSQ8TAI1 123 aa6.82□□□□□ -1.32
CLSTN3-209ENST00000539982 CRYGAP11844 174 aa6.81□□□□□ -1.32
CLSTN3-209ENST00000539982 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
CLSTN3-209ENST00000539982 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
CLSTN3-209ENST00000539982 VCX2Q9H322 139 aa6.81□□□□□ -1.32
CLSTN3-209ENST00000539982 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
CLSTN3-209ENST00000539982 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 LINC00518Q8N0U6 118 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 AMELXQ99217 191 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 C12orf57Q99622 126 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1584.4 ms