RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 CKS1BP61024 79 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 Q8IZM0 81 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 STPG4Q8N801 248 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 FAT1Q14517 4588 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
PRPF19-204ENST00000539960 H3BRM9 83 aa8.49□□□□□ -1.05
PRPF19-204ENST00000539960 S100A1P23297 94 aa8.49□□□□□ -1.05
PRPF19-204ENST00000539960 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
PRPF19-204ENST00000539960 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
PRPF19-204ENST00000539960 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
PRPF19-204ENST00000539960 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BKO60814 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BJP06899 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 ZNF22P17026 224 aaPredicted RBP8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BOP23527 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BBP33778 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BDP58876 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BCP62807 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST2H2BEQ16778 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.47□□□□□ -1.05
PRPF19-204ENST00000539960 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BHQ93079 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BNQ99877 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 HIST1H2BMQ99879 126 aa8.47□□□□□ -1.05
PRPF19-204ENST00000539960 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
PRPF19-204ENST00000539960 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
PRPF19-204ENST00000539960 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.06
PRPF19-204ENST00000539960 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
PRPF19-204ENST00000539960 Q6ZRP5 223 aa8.46□□□□□ -1.06
PRPF19-204ENST00000539960 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
PRPF19-204ENST00000539960 F8VRH5 84 aa8.45□□□□□ -1.06
PRPF19-204ENST00000539960 CXCL5P42830 114 aa8.45□□□□□ -1.06
PRPF19-204ENST00000539960 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 FABP4P15090 132 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
PRPF19-204ENST00000539960 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
PRPF19-204ENST00000539960 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
PRPF19-204ENST00000539960 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
PRPF19-204ENST00000539960 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
PRPF19-204ENST00000539960 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
PRPF19-204ENST00000539960 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
PRPF19-204ENST00000539960 H0Y8G0 127 aa8.41□□□□□ -1.06
PRPF19-204ENST00000539960 ODF1Q14990 250 aa8.41□□□□□ -1.06
PRPF19-204ENST00000539960 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
PRPF19-204ENST00000539960 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
PRPF19-204ENST00000539960 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
PRPF19-204ENST00000539960 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
PRPF19-204ENST00000539960 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
PRPF19-204ENST00000539960 DPM2O94777 84 aa8.36□□□□□ -1.07
PRPF19-204ENST00000539960 PLNP26678 52 aa8.36□□□□□ -1.07
PRPF19-204ENST00000539960 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
PRPF19-204ENST00000539960 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
PRPF19-204ENST00000539960 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
PRPF19-204ENST00000539960 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
PRPF19-204ENST00000539960 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
PRPF19-204ENST00000539960 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
PRPF19-204ENST00000539960 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
PRPF19-204ENST00000539960 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
PRPF19-204ENST00000539960 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
PRPF19-204ENST00000539960 IGKCP01834 107 aa8.34□□□□□ -1.07
PRPF19-204ENST00000539960 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
PRPF19-204ENST00000539960 PFN2P35080 140 aa8.33□□□□□ -1.08
PRPF19-204ENST00000539960 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
PRPF19-204ENST00000539960 COX17Q14061 63 aa8.33□□□□□ -1.08
PRPF19-204ENST00000539960 ERG28Q9UKR5 140 aa8.33□□□□□ -1.08
PRPF19-204ENST00000539960 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
PRPF19-204ENST00000539960 M0QXV9 152 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 LEPROTO15243 131 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 PET117Q6UWS5 81 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 PLA2G2DQ9UNK4 145 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 C22orf24Q9Y442 160 aa8.31□□□□□ -1.08
PRPF19-204ENST00000539960 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
PRPF19-204ENST00000539960 HERVK_113P61574 105 aa8.3□□□□□ -1.08
PRPF19-204ENST00000539960 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
PRPF19-204ENST00000539960 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
PRPF19-204ENST00000539960 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
PRPF19-204ENST00000539960 LINC00158P58513 81 aa8.29□□□□□ -1.08
PRPF19-204ENST00000539960 HERV-K104P63124 156 aa8.29□□□□□ -1.08
PRPF19-204ENST00000539960 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
PRPF19-204ENST00000539960 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
PRPF19-204ENST00000539960 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
PRPF19-204ENST00000539960 J3QQQ9 107 aa8.28□□□□□ -1.08
PRPF19-204ENST00000539960 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
PRPF19-204ENST00000539960 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
PRPF19-204ENST00000539960 TP73-AS1Q9UF72 201 aa8.28□□□□□ -1.08
PRPF19-204ENST00000539960 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
PRPF19-204ENST00000539960 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
PRPF19-204ENST00000539960 KRTDAPP60985 99 aa8.27□□□□□ -1.09
PRPF19-204ENST00000539960 UBE2BP63146 152 aa8.27□□□□□ -1.09
PRPF19-204ENST00000539960 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
PRPF19-204ENST00000539960 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
PRPF19-204ENST00000539960 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms