RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 LINC01620Q4KN68 170 aa5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 DPH3Q96FX2 82 aa5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-208ENST00000538987 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 GCSHP23434 173 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 MAJINQ3KP22 176 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 CDPF1Q6NVV7 123 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 NDUFA12Q9UI09 145 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
LPCAT3-208ENST00000538987 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 A0A1B0GVY2 172 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 C16orf90A8MZG2 172 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 ANKRD39Q53RE8 183 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 RYR2Q92736 4967 aa5.58□□□□□ -1.52
LPCAT3-208ENST00000538987 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 IGKV2D-26A0A0A0MRZ7 120 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 PFN2P35080 140 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 LINC00158P58513 81 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 HERV-K104P63124 156 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 RPL18AQ02543 176 aaKnown RBP5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 GAGE2BQ13066 116 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 VAMP8Q9BV40 100 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
LPCAT3-208ENST00000538987 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 LOC107984640A0A0U1RRK4 108 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 LINC00587B1AMM8 73 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 S100A12P80511 92 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 DNAH10Q8IVF4 4471 aa5.56□□□□□ -1.52
LPCAT3-208ENST00000538987 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 LOC105371267A0A1B0GV96 52 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 SPATA45Q537H7 98 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 TTTY13Q9BZ97 58 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 DNAH17Q9UFH2 4485 aa5.55□□□□□ -1.52
LPCAT3-208ENST00000538987 RYR3Q15413 4870 aa5.54□□□□□ -1.52
LPCAT3-208ENST00000538987 NDUFC2-KCTD14E9PQ53 114 aa5.54□□□□□ -1.52
LPCAT3-208ENST00000538987 SMIM13P0DJ93 91 aa5.54□□□□□ -1.52
LPCAT3-208ENST00000538987 COX17Q14061 63 aa5.54□□□□□ -1.52
LPCAT3-208ENST00000538987 PCP2Q8IVA1 136 aa5.54□□□□□ -1.52
LPCAT3-208ENST00000538987 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
LPCAT3-208ENST00000538987 KRTAP10-1P60331 282 aa5.53□□□□□ -1.52
LPCAT3-208ENST00000538987 C14orf144Q96I85 54 aa5.53□□□□□ -1.52
LPCAT3-208ENST00000538987 A0A096LNI7 61 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 Q6ZRP5 223 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 XAGE1AQ9HD64 81 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
LPCAT3-208ENST00000538987 MIR7-3HGQ8N6C7 128 aa5.51□□□□□ -1.53
LPCAT3-208ENST00000538987 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 COX8AP10176 69 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 NPC2P61916 151 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 SLC25A34Q6PIV7 304 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 DAND5Q8N907 189 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 FAM30AQ9NZY2 134 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 FAT2Q9NYQ8 4349 aa5.5□□□□□ -1.53
LPCAT3-208ENST00000538987 TMEM238C9JI98 176 aa5.49□□□□□ -1.53
LPCAT3-208ENST00000538987 SRSF9Q13242 221 aaKnown RBP eCLIP5.49□□□□□ -1.53
LPCAT3-208ENST00000538987 BOD1L2Q8IYS8 172 aa5.49□□□□□ -1.53
LPCAT3-208ENST00000538987 PANO1I0J062 215 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 TIMM17BO60830 172 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 HAMPP81172 84 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 ADAMTSL4-AS1Q5T5F5 129 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 SPACA4Q8TDM5 124 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 C12orf57Q99622 126 aa5.48□□□□□ -1.53
LPCAT3-208ENST00000538987 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 A0A087WYN8 130 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 FAM168BA1KXE4 195 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 DLEU1O43261 78 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 RPL24P83731 157 aaKnown RBP5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 FAM19A5Q7Z5A7 132 aaPredicted RBP5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 TP73-AS1Q9UF72 201 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 PKD1P98161 4303 aa5.47□□□□□ -1.53
LPCAT3-208ENST00000538987 SCXQ7RTU7 201 aa5.46□□□□□ -1.54
LPCAT3-208ENST00000538987 NKAPP1Q8N9T2 125 aa5.46□□□□□ -1.54
LPCAT3-208ENST00000538987 COPS9Q8WXC6 57 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms