RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 IFI27L1Q96BM0 104 aa13.33□□□□□ -0.28
LPCAT3-204ENST00000536797 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
LPCAT3-204ENST00000536797 LINC00310P59036 64 aa13.32□□□□□ -0.28
LPCAT3-204ENST00000536797 CKS1BP61024 79 aa13.32□□□□□ -0.28
LPCAT3-204ENST00000536797 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
LPCAT3-204ENST00000536797 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
LPCAT3-204ENST00000536797 TRBV30A0A0K0K1B3 111 aa13.31□□□□□ -0.28
LPCAT3-204ENST00000536797 RPL18AQ02543 176 aaKnown RBP13.31□□□□□ -0.28
LPCAT3-204ENST00000536797 STPG4Q8N801 248 aa13.31□□□□□ -0.28
LPCAT3-204ENST00000536797 PLAC8Q9NZF1 115 aa13.31□□□□□ -0.28
LPCAT3-204ENST00000536797 PLA2G1BP04054 148 aaKnown RBP13.3□□□□□ -0.28
LPCAT3-204ENST00000536797 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
LPCAT3-204ENST00000536797 CHTOPQ9Y3Y2 248 aaKnown RBP13.3□□□□□ -0.28
LPCAT3-204ENST00000536797 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
LPCAT3-204ENST00000536797 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
LPCAT3-204ENST00000536797 NUPR1O60356 82 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BKO60814 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BJP06899 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 TLX1NBP0CAT3 122 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 ZNF22P17026 224 aaPredicted RBP13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BOP23527 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BBP33778 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 CXCL5P42830 114 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BDP58876 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BCP62807 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST2H2BEQ16778 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 COX7B2Q8TF08 81 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BHQ93079 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BNQ99877 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 HIST1H2BMQ99879 126 aa13.28□□□□□ -0.28
LPCAT3-204ENST00000536797 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
LPCAT3-204ENST00000536797 F8VRH5 84 aa13.25□□□□□ -0.29
LPCAT3-204ENST00000536797 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
LPCAT3-204ENST00000536797 Q6ZRP5 223 aa13.24□□□□□ -0.29
LPCAT3-204ENST00000536797 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
LPCAT3-204ENST00000536797 FABP4P15090 132 aa13.23□□□□□ -0.29
LPCAT3-204ENST00000536797 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
LPCAT3-204ENST00000536797 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 H0Y8G0 127 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 INAFM2P0DMQ5 153 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 RPL37AP61513 92 aaKnown RBP13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 GAGE2EQ4V326 116 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 GAGE2DQ9UEU5 116 aa13.22□□□□□ -0.29
LPCAT3-204ENST00000536797 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
LPCAT3-204ENST00000536797 ODF1Q14990 250 aa13.19□□□□□ -0.3
LPCAT3-204ENST00000536797 A0A1W2PNN7 141 aa13.18□□□□□ -0.3
LPCAT3-204ENST00000536797 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
LPCAT3-204ENST00000536797 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
LPCAT3-204ENST00000536797 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.3
LPCAT3-204ENST00000536797 FAM168BA1KXE4 195 aa13.13□□□□□ -0.31
LPCAT3-204ENST00000536797 PLNP26678 52 aa13.13□□□□□ -0.31
LPCAT3-204ENST00000536797 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-204ENST00000536797 C9orf129Q5T035 196 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-204ENST00000536797 PKHD1L1Q86WI1 4243 aa13.13□□□□□ -0.31
LPCAT3-204ENST00000536797 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
LPCAT3-204ENST00000536797 FAM19A5Q7Z5A7 132 aaPredicted RBP13.12□□□□□ -0.31
LPCAT3-204ENST00000536797 TMA7Q9Y2S6 64 aaKnown RBP13.12□□□□□ -0.31
LPCAT3-204ENST00000536797 DPM2O94777 84 aa13.1□□□□□ -0.31
LPCAT3-204ENST00000536797 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
LPCAT3-204ENST00000536797 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
LPCAT3-204ENST00000536797 IGKCP01834 107 aa13.09□□□□□ -0.31
LPCAT3-204ENST00000536797 PHF5AQ7RTV0 110 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-204ENST00000536797 SYS1-DBNDD2H3BUS1 97 aa13.07□□□□□ -0.32
LPCAT3-204ENST00000536797 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
LPCAT3-204ENST00000536797 ZNF625Q96I27 306 aaPredicted RBP13.07□□□□□ -0.32
LPCAT3-204ENST00000536797 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
LPCAT3-204ENST00000536797 PFN2P35080 140 aa13.06□□□□□ -0.32
LPCAT3-204ENST00000536797 M0QXV9 152 aa13.05□□□□□ -0.32
LPCAT3-204ENST00000536797 COX17Q14061 63 aa13.05□□□□□ -0.32
LPCAT3-204ENST00000536797 KRTAP7-1Q8IUC3 87 aa13.05□□□□□ -0.32
LPCAT3-204ENST00000536797 MYCBP2O75592 4640 aa13.05□□□□□ -0.32
LPCAT3-204ENST00000536797 HERVK_113P61574 105 aa13.05□□□□□ -0.32
LPCAT3-204ENST00000536797 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
LPCAT3-204ENST00000536797 FLG2Q5D862 2391 aaPredicted RBP13.04□□□□□ -0.32
LPCAT3-204ENST00000536797 SERTAD4-AS1Q5TG53 156 aa13.03□□□□□ -0.32
LPCAT3-204ENST00000536797 S100A6P06703 90 aa13.02□□□□□ -0.33
LPCAT3-204ENST00000536797 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
LPCAT3-204ENST00000536797 LEPROTO15243 131 aa13.01□□□□□ -0.33
LPCAT3-204ENST00000536797 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
LPCAT3-204ENST00000536797 C3orf79P0CE67 100 aa13□□□□□ -0.33
LPCAT3-204ENST00000536797 HERV-K104P63124 156 aa13□□□□□ -0.33
LPCAT3-204ENST00000536797 UBE2BP63146 152 aa13□□□□□ -0.33
LPCAT3-204ENST00000536797 NDUFA12Q9UI09 145 aa13□□□□□ -0.33
LPCAT3-204ENST00000536797 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
LPCAT3-204ENST00000536797 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
LPCAT3-204ENST00000536797 C22orf24Q9Y442 160 aa12.99□□□□□ -0.33
LPCAT3-204ENST00000536797 MYMXA0A1B0GTQ4 84 aa12.98□□□□□ -0.33
LPCAT3-204ENST00000536797 LINC00158P58513 81 aa12.98□□□□□ -0.33
LPCAT3-204ENST00000536797 KRTDAPP60985 99 aa12.98□□□□□ -0.33
LPCAT3-204ENST00000536797 PLA2G2DQ9UNK4 145 aa12.98□□□□□ -0.33
LPCAT3-204ENST00000536797 J3QQQ9 107 aa12.97□□□□□ -0.33
LPCAT3-204ENST00000536797 TSPEAR-AS2P59090 65 aa12.97□□□□□ -0.33
LPCAT3-204ENST00000536797 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
LPCAT3-204ENST00000536797 SND1-IT1Q9HBX3 110 aa12.97□□□□□ -0.33
LPCAT3-204ENST00000536797 TP73-AS1Q9UF72 201 aa12.97□□□□□ -0.33
LPCAT3-204ENST00000536797 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-204ENST00000536797 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms