RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 IGHV3OR16-12A0A075B7B8 117 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 KNCNA6PVL3 124 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1A1P0DJD3 496 aaKnown RBP5.56□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1CP0DJD4 496 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 HTN1P15515 57 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 DEFB131AP59861 70 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1FQ15415 496 aaKnown RBP5.56□□□□□ -1.52
CPSF7-216ENST00000536548 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 OR13C6PQ8NH95 151 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
CPSF7-216ENST00000536548 UBE2E2Q96LR5 201 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 IGHV3-38A0A0C4DH36 116 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 LCE6AA0A183 80 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 C3orf84H3BNL1 204 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 LINC00694P0DN24 101 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 HOXD3P31249 432 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-216ENST00000536548 COX6A2Q02221 97 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 RPL18AQ02543 176 aaKnown RBP5.55□□□□□ -1.52
CPSF7-216ENST00000536548 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 SOSTDC1Q6X4U4 206 aa5.55□□□□□ -1.52
CPSF7-216ENST00000536548 TMEM258P61165 79 aa5.54□□□□□ -1.52
CPSF7-216ENST00000536548 Q6ZSN1 163 aa5.54□□□□□ -1.52
CPSF7-216ENST00000536548 C11orf72Q8NBR9 251 aa5.54□□□□□ -1.52
CPSF7-216ENST00000536548 KIAA1109Q2LD37 5005 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 A0A0U1RRA0 63 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1BA6NDE4 496 aaKnown RBP5.53□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1EA6NEQ0 496 aaKnown RBP5.53□□□□□ -1.52
CPSF7-216ENST00000536548 F5H768 121 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 K7EQD1 137 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 UBE2L6O14933 153 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 RBMY1DP0C7P1 496 aaKnown RBP5.53□□□□□ -1.52
CPSF7-216ENST00000536548 DEFB112Q30KQ8 113 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 Q8N2B8 174 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 C11orf44Q8N8P7 122 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 COX7B2Q8TF08 81 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 C2orf48Q96LS8 159 aa5.53□□□□□ -1.52
CPSF7-216ENST00000536548 PLECQ15149 4684 aaKnown RBP5.52□□□□□ -1.53
CPSF7-216ENST00000536548 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 ATP5EP2Q5VTU8 51 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 OBSCN-AS1Q96MR7 158 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 SND1-IT1Q9HBX3 110 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 KLK5Q9Y337 293 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-216ENST00000536548 C22orf24Q9Y442 160 aa5.52□□□□□ -1.53
CPSF7-216ENST00000536548 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 IBA57-AS1B1ANH7 110 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 IGHV4-59P01825 116 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 MIR7-3HGQ8N6C7 128 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 DYNLRB2Q8TF09 96 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 B9D2Q9BPU9 175 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 MAP6D1Q9H9H5 199 aa5.51□□□□□ -1.53
CPSF7-216ENST00000536548 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 TRAV25A0A0B4J276 109 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 NDUFC2-KCTD14E9PQ53 114 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 LINC00158P58513 81 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 Q6YL49 198 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 IL17DQ8TAD2 202 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 SMIM11BQ8TCY0 68 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 Q9HAA7 133 aa5.5□□□□□ -1.53
CPSF7-216ENST00000536548 TRGV1A0A0A0MS02 117 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 JMJD7-PLA2G4BH0Y9G9 81 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 CMC4P56277 68 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-216ENST00000536548 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 C10orf99Q6UWK7 81 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-216ENST00000536548 LINC00337Q8N6G1 96 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 MUC7Q8TAX7 377 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 ORMDL1Q9P0S3 153 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 Q9UF83 564 aa5.49□□□□□ -1.53
CPSF7-216ENST00000536548 USP17L23D6RBM5 183 aa5.48□□□□□ -1.53
CPSF7-216ENST00000536548 SLURP1P55000 103 aa5.48□□□□□ -1.53
CPSF7-216ENST00000536548 ZNF702PQ9H963 129 aa5.48□□□□□ -1.53
CPSF7-216ENST00000536548 C14orf132Q9NPU4 83 aa5.48□□□□□ -1.53
CPSF7-216ENST00000536548 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
CPSF7-216ENST00000536548 IGKV2-28A0A075B6P5 120 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 A0A087WYN8 130 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 LOC107984640A0A0U1RRK4 108 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 LECT2O14960 151 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 BCE1O60756 84 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 NDUFC2O95298 119 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 IGKV2D-28P01615 120 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 CCKP06307 115 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 CCL18P55774 89 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 NTM-AS1Q6ZSK4 140 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 STHQ8IWL8 128 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 TMEM86BQ8N661 226 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 C4orf3Q8WVX3 66 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
CPSF7-216ENST00000536548 TRBV10-3A0A0K0K1G6 114 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 A0A1W2PRX2 142 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 PAX4O43316 350 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms