RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 C6orf48Q9UBA6 75 aa7.17□□□□□ -1.26
TNFRSF1A-208ENST00000536194 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 S100A1P23297 94 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 MAJINQ3KP22 176 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 Q8IZM0 81 aa7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
TNFRSF1A-208ENST00000536194 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.26
TNFRSF1A-208ENST00000536194 KRTAP10-4P60372 401 aaPredicted RBP7.15□□□□□ -1.26
TNFRSF1A-208ENST00000536194 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.26
TNFRSF1A-208ENST00000536194 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 PRSS2P07478 247 aa7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
TNFRSF1A-208ENST00000536194 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 TRBV30A0A0K0K1B3 111 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 TLX1NBP0CAT3 122 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 Q6ZRP5 223 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 STPG4Q8N801 248 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 COX7B2Q8TF08 81 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
TNFRSF1A-208ENST00000536194 ABCA13Q86UQ4 5058 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 PCLOQ9Y6V0 5065 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 H3BRM9 83 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 FABP4P15090 132 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 CKS1BP61024 79 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 ODF1Q14990 250 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 LINC00474Q9P2X8 69 aa7.12□□□□□ -1.27
TNFRSF1A-208ENST00000536194 A0A1W2PNN7 141 aa7.11□□□□□ -1.27
TNFRSF1A-208ENST00000536194 F8VRH5 84 aa7.11□□□□□ -1.27
TNFRSF1A-208ENST00000536194 H0Y8G0 127 aa7.11□□□□□ -1.27
TNFRSF1A-208ENST00000536194 TMEM170BQ5T4T1 132 aa7.11□□□□□ -1.27
TNFRSF1A-208ENST00000536194 CXCL5P42830 114 aa7.1□□□□□ -1.27
TNFRSF1A-208ENST00000536194 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
TNFRSF1A-208ENST00000536194 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
TNFRSF1A-208ENST00000536194 HSPB8Q9UJY1 196 aa7.1□□□□□ -1.27
TNFRSF1A-208ENST00000536194 TMEM223A0PJW6 202 aa7.09□□□□□ -1.27
TNFRSF1A-208ENST00000536194 NDUFC2-KCTD14E9PQ53 114 aa7.09□□□□□ -1.27
TNFRSF1A-208ENST00000536194 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
TNFRSF1A-208ENST00000536194 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.27
TNFRSF1A-208ENST00000536194 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.27
TNFRSF1A-208ENST00000536194 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
TNFRSF1A-208ENST00000536194 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
TNFRSF1A-208ENST00000536194 C9orf129Q5T035 196 aaKnown RBP7.08□□□□□ -1.28
TNFRSF1A-208ENST00000536194 INAFM2P0DMQ5 153 aa7.07□□□□□ -1.28
TNFRSF1A-208ENST00000536194 PMCHL2Q9BQD1 86 aa7.07□□□□□ -1.28
TNFRSF1A-208ENST00000536194 VPS13BQ7Z7G8 4022 aa7.06□□□□□ -1.28
TNFRSF1A-208ENST00000536194 HNRNPA3P51991 378 aaKnown RBP7.06□□□□□ -1.28
TNFRSF1A-208ENST00000536194 ZNF625Q96I27 306 aaPredicted RBP7.06□□□□□ -1.28
TNFRSF1A-208ENST00000536194 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
TNFRSF1A-208ENST00000536194 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
TNFRSF1A-208ENST00000536194 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
TNFRSF1A-208ENST00000536194 SYS1-DBNDD2H3BUS1 97 aa7.04□□□□□ -1.28
TNFRSF1A-208ENST00000536194 DPM2O94777 84 aa7.04□□□□□ -1.28
TNFRSF1A-208ENST00000536194 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-208ENST00000536194 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
TNFRSF1A-208ENST00000536194 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 IGKCP01834 107 aa7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 PLNP26678 52 aa7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 TSPEAR-AS2P59090 65 aa7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
TNFRSF1A-208ENST00000536194 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PFN2P35080 140 aa7.02□□□□□ -1.29
TNFRSF1A-208ENST00000536194 ERG28Q9UKR5 140 aa7.02□□□□□ -1.29
TNFRSF1A-208ENST00000536194 M0QXV9 152 aa7.01□□□□□ -1.29
TNFRSF1A-208ENST00000536194 LINC01545Q5VT33 79 aa7.01□□□□□ -1.29
TNFRSF1A-208ENST00000536194 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
TNFRSF1A-208ENST00000536194 LEPROTO15243 131 aa7□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PET117Q6UWS5 81 aa7□□□□□ -1.29
TNFRSF1A-208ENST00000536194 KRTDAPP60985 99 aa6.99□□□□□ -1.29
TNFRSF1A-208ENST00000536194 COX17Q14061 63 aa6.99□□□□□ -1.29
TNFRSF1A-208ENST00000536194 SFTA2Q6UW10 78 aa6.99□□□□□ -1.29
TNFRSF1A-208ENST00000536194 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
TNFRSF1A-208ENST00000536194 HIST3H2BBQ8N257 126 aa6.98□□□□□ -1.29
TNFRSF1A-208ENST00000536194 Q8NDZ9 215 aa6.98□□□□□ -1.29
TNFRSF1A-208ENST00000536194 SND1-IT1Q9HBX3 110 aa6.98□□□□□ -1.29
TNFRSF1A-208ENST00000536194 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
TNFRSF1A-208ENST00000536194 A0A0U1RRA0 63 aa6.97□□□□□ -1.29
TNFRSF1A-208ENST00000536194 J3QQQ9 107 aa6.97□□□□□ -1.29
TNFRSF1A-208ENST00000536194 HERVK_113P61574 105 aa6.97□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
TNFRSF1A-208ENST00000536194 PKHD1L1Q86WI1 4243 aa6.96□□□□□ -1.29
TNFRSF1A-208ENST00000536194 E9PLD3 99 aa6.96□□□□□ -1.3
TNFRSF1A-208ENST00000536194 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LINC00158P58513 81 aa6.96□□□□□ -1.3
TNFRSF1A-208ENST00000536194 HERV-K104P63124 156 aa6.96□□□□□ -1.3
TNFRSF1A-208ENST00000536194 HIST1H2BLQ99880 126 aa6.96□□□□□ -1.3
TNFRSF1A-208ENST00000536194 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
TNFRSF1A-208ENST00000536194 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms