RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
VAMP1-205ENST00000535927 CAMK2N2Q96S95 79 aa10.61□□□□□ -0.71
VAMP1-205ENST00000535927 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
VAMP1-205ENST00000535927 J3QQQ9 107 aa10.6□□□□□ -0.71
VAMP1-205ENST00000535927 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
VAMP1-205ENST00000535927 WFDC2Q14508 124 aa10.6□□□□□ -0.71
VAMP1-205ENST00000535927 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
VAMP1-205ENST00000535927 STPG4Q8N801 248 aa10.6□□□□□ -0.71
VAMP1-205ENST00000535927 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
VAMP1-205ENST00000535927 COX17Q14061 63 aa10.58□□□□□ -0.72
VAMP1-205ENST00000535927 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
VAMP1-205ENST00000535927 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
VAMP1-205ENST00000535927 HECTD4Q9Y4D8 3996 aa10.58□□□□□ -0.72
VAMP1-205ENST00000535927 S100A12P80511 92 aa10.57□□□□□ -0.72
VAMP1-205ENST00000535927 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
VAMP1-205ENST00000535927 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
VAMP1-205ENST00000535927 VAMP8Q9BV40 100 aa10.57□□□□□ -0.72
VAMP1-205ENST00000535927 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
VAMP1-205ENST00000535927 KIAA1109Q2LD37 5005 aa10.57□□□□□ -0.72
VAMP1-205ENST00000535927 IGLV5-52A0A0A0MRZ9 124 aa10.55□□□□□ -0.72
VAMP1-205ENST00000535927 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
VAMP1-205ENST00000535927 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
VAMP1-205ENST00000535927 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.54□□□□□ -0.72
VAMP1-205ENST00000535927 SLPIP03973 132 aa10.54□□□□□ -0.72
VAMP1-205ENST00000535927 ANKRD39Q53RE8 183 aa10.54□□□□□ -0.72
VAMP1-205ENST00000535927 Q6ZRU5 148 aa10.54□□□□□ -0.72
VAMP1-205ENST00000535927 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
VAMP1-205ENST00000535927 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
VAMP1-205ENST00000535927 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
VAMP1-205ENST00000535927 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
VAMP1-205ENST00000535927 LOC107984640A0A0U1RRK4 108 aa10.52□□□□□ -0.73
VAMP1-205ENST00000535927 GCSHP23434 173 aa10.52□□□□□ -0.73
VAMP1-205ENST00000535927 C12orf57Q99622 126 aa10.52□□□□□ -0.73
VAMP1-205ENST00000535927 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
VAMP1-205ENST00000535927 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
VAMP1-205ENST00000535927 DLEU1O43261 78 aa10.51□□□□□ -0.73
VAMP1-205ENST00000535927 C6orf48Q9UBA6 75 aa10.51□□□□□ -0.73
VAMP1-205ENST00000535927 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 TIMM17BO60830 172 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 SPATA45Q537H7 98 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 C10orf25Q5T742 122 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 DNAH2Q9P225 4427 aa10.5□□□□□ -0.73
VAMP1-205ENST00000535927 DNAH17Q9UFH2 4485 aa10.49□□□□□ -0.73
VAMP1-205ENST00000535927 COX8AP10176 69 aa10.49□□□□□ -0.73
VAMP1-205ENST00000535927 MAJINQ3KP22 176 aa10.49□□□□□ -0.73
VAMP1-205ENST00000535927 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
VAMP1-205ENST00000535927 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
VAMP1-205ENST00000535927 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
VAMP1-205ENST00000535927 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
VAMP1-205ENST00000535927 MEIG1Q5JSS6 88 aa10.47□□□□□ -0.73
VAMP1-205ENST00000535927 Q6ZVH6 145 aa10.47□□□□□ -0.73
VAMP1-205ENST00000535927 BOD1L2Q8IYS8 172 aa10.47□□□□□ -0.73
VAMP1-205ENST00000535927 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
VAMP1-205ENST00000535927 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
VAMP1-205ENST00000535927 COPS9Q8WXC6 57 aa10.46□□□□□ -0.73
VAMP1-205ENST00000535927 SLC25A34Q6PIV7 304 aa10.45□□□□□ -0.74
VAMP1-205ENST00000535927 SCGB1D4Q6XE38 83 aa10.45□□□□□ -0.74
VAMP1-205ENST00000535927 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
VAMP1-205ENST00000535927 TMEM238C9JI98 176 aa10.44□□□□□ -0.74
VAMP1-205ENST00000535927 LINC00158P58513 81 aa10.44□□□□□ -0.74
VAMP1-205ENST00000535927 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
VAMP1-205ENST00000535927 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
VAMP1-205ENST00000535927 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
VAMP1-205ENST00000535927 LOC107984156A0A0G2JMH3 177 aa10.42□□□□□ -0.74
VAMP1-205ENST00000535927 PFN2P35080 140 aa10.42□□□□□ -0.74
VAMP1-205ENST00000535927 ARL17AQ8IVW1 177 aa10.42□□□□□ -0.74
VAMP1-205ENST00000535927 TSTD3H0UI37 97 aa10.41□□□□□ -0.74
VAMP1-205ENST00000535927 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
VAMP1-205ENST00000535927 Q6ZRP5 223 aa10.41□□□□□ -0.74
VAMP1-205ENST00000535927 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
VAMP1-205ENST00000535927 IFITM1P13164 125 aa10.4□□□□□ -0.74
VAMP1-205ENST00000535927 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
VAMP1-205ENST00000535927 GAGE2BQ13066 116 aa10.4□□□□□ -0.74
VAMP1-205ENST00000535927 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
VAMP1-205ENST00000535927 UQCR10Q9UDW1 63 aa10.4□□□□□ -0.74
VAMP1-205ENST00000535927 PLA2G2DQ9UNK4 145 aa10.4□□□□□ -0.74
VAMP1-205ENST00000535927 C14orf144Q96I85 54 aa10.39□□□□□ -0.75
VAMP1-205ENST00000535927 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
VAMP1-205ENST00000535927 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
VAMP1-205ENST00000535927 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
VAMP1-205ENST00000535927 FAT2Q9NYQ8 4349 aa10.39□□□□□ -0.75
VAMP1-205ENST00000535927 Q6ZSA8 131 aa10.38□□□□□ -0.75
VAMP1-205ENST00000535927 MIR7-3HGQ8N6C7 128 aa10.38□□□□□ -0.75
VAMP1-205ENST00000535927 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
VAMP1-205ENST00000535927 ABCA13Q86UQ4 5058 aa10.38□□□□□ -0.75
VAMP1-205ENST00000535927 A0A096LNI7 61 aa10.37□□□□□ -0.75
VAMP1-205ENST00000535927 RPL24P83731 157 aaKnown RBP10.37□□□□□ -0.75
VAMP1-205ENST00000535927 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
VAMP1-205ENST00000535927 LITAFQ99732 161 aa10.37□□□□□ -0.75
VAMP1-205ENST00000535927 MIEN1Q9BRT3 115 aa10.37□□□□□ -0.75
VAMP1-205ENST00000535927 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
VAMP1-205ENST00000535927 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
VAMP1-205ENST00000535927 PKHD1P08F94 4074 aa10.36□□□□□ -0.75
VAMP1-205ENST00000535927 EPM2AB3EWF7 344 aa10.35□□□□□ -0.75
VAMP1-205ENST00000535927 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
VAMP1-205ENST00000535927 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
VAMP1-205ENST00000535927 TAL2Q16559 108 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms