RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 C10orf25Q5T742 122 aa14.06□□□□□ -0.16
VPS37C-202ENST00000535818 Q8IZM0 81 aa14.06□□□□□ -0.16
VPS37C-202ENST00000535818 ATP6V1G1O75348 118 aa14.05□□□□□ -0.16
VPS37C-202ENST00000535818 IGLC3P0DOY3 106 aa14.05□□□□□ -0.16
VPS37C-202ENST00000535818 C6orf226Q5I0X4 101 aa14.05□□□□□ -0.16
VPS37C-202ENST00000535818 VPS13BQ7Z7G8 4022 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 LEPROTL1O95214 131 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 CXCL5P42830 114 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 CKS1BP61024 79 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 C2orf82Q6UX34 121 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 FAM19A2Q8N3H0 131 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 C6orf48Q9UBA6 75 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 HSPB8Q9UJY1 196 aa14.04□□□□□ -0.16
VPS37C-202ENST00000535818 TRAV12-1A0A0B4J245 112 aa14.03□□□□□ -0.16
VPS37C-202ENST00000535818 TRBV30A0A0K0K1B3 111 aa14.03□□□□□ -0.16
VPS37C-202ENST00000535818 C7orf33Q8WU49 177 aa14.03□□□□□ -0.16
VPS37C-202ENST00000535818 SMIM1B2RUZ4 78 aa14.01□□□□□ -0.17
VPS37C-202ENST00000535818 CHTOPQ9Y3Y2 248 aaKnown RBP14.01□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BKO60814 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BJP06899 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BOP23527 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BBP33778 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BDP58876 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BCP62807 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST2H2BEQ16778 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST2H2BFQ5QNW6 126 aaPredicted RBP14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BHQ93079 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BNQ99877 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 HIST1H2BMQ99879 126 aa14□□□□□ -0.17
VPS37C-202ENST00000535818 KRTAP10-4P60372 401 aaPredicted RBP13.99□□□□□ -0.17
VPS37C-202ENST00000535818 SPINK8P0C7L1 97 aa13.98□□□□□ -0.17
VPS37C-202ENST00000535818 TLX1NBP0CAT3 122 aa13.98□□□□□ -0.17
VPS37C-202ENST00000535818 LINC00310P59036 64 aa13.98□□□□□ -0.17
VPS37C-202ENST00000535818 SRRM2Q9UQ35 2752 aaKnown RBP13.98□□□□□ -0.17
VPS37C-202ENST00000535818 F8VRH5 84 aa13.97□□□□□ -0.17
VPS37C-202ENST00000535818 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
VPS37C-202ENST00000535818 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
VPS37C-202ENST00000535818 GAGE2EQ4V326 116 aa13.96□□□□□ -0.17
VPS37C-202ENST00000535818 TMEM170BQ5T4T1 132 aa13.96□□□□□ -0.17
VPS37C-202ENST00000535818 Q6ZRP5 223 aa13.96□□□□□ -0.17
VPS37C-202ENST00000535818 GAGE2DQ9UEU5 116 aa13.96□□□□□ -0.17
VPS37C-202ENST00000535818 C9orf116Q5BN46 136 aaPredicted RBP13.95□□□□□ -0.18
VPS37C-202ENST00000535818 C11orf86A6NJI1 115 aa13.94□□□□□ -0.18
VPS37C-202ENST00000535818 A0A1W2PNN7 141 aa13.93□□□□□ -0.18
VPS37C-202ENST00000535818 NDUFC2-KCTD14E9PQ53 114 aa13.93□□□□□ -0.18
VPS37C-202ENST00000535818 FABP4P15090 132 aa13.93□□□□□ -0.18
VPS37C-202ENST00000535818 SFTA2Q6UW10 78 aa13.93□□□□□ -0.18
VPS37C-202ENST00000535818 NUPR1O60356 82 aa13.92□□□□□ -0.18
VPS37C-202ENST00000535818 MAP1LC3CQ9BXW4 147 aa13.92□□□□□ -0.18
VPS37C-202ENST00000535818 IGLV5-39A0A0G2JS06 123 aa13.91□□□□□ -0.18
VPS37C-202ENST00000535818 H0Y8G0 127 aa13.91□□□□□ -0.18
VPS37C-202ENST00000535818 PLNP26678 52 aa13.89□□□□□ -0.19
VPS37C-202ENST00000535818 ODF1Q14990 250 aa13.89□□□□□ -0.19
VPS37C-202ENST00000535818 COA6Q5JTJ3 125 aaKnown RBP13.89□□□□□ -0.19
VPS37C-202ENST00000535818 FLG2Q5D862 2391 aaPredicted RBP13.89□□□□□ -0.19
VPS37C-202ENST00000535818 FAM19A5Q7Z5A7 132 aaPredicted RBP13.87□□□□□ -0.19
VPS37C-202ENST00000535818 FAM168BA1KXE4 195 aa13.86□□□□□ -0.19
VPS37C-202ENST00000535818 HNRNPA3P51991 378 aaKnown RBP13.86□□□□□ -0.19
VPS37C-202ENST00000535818 PRR3P79522 188 aaKnown RBP13.86□□□□□ -0.19
VPS37C-202ENST00000535818 PHF5AQ7RTV0 110 aaKnown RBP13.85□□□□□ -0.19
VPS37C-202ENST00000535818 TMEM223A0PJW6 202 aa13.84□□□□□ -0.19
VPS37C-202ENST00000535818 DPM2O94777 84 aa13.84□□□□□ -0.19
VPS37C-202ENST00000535818 HERVK_113P61574 105 aa13.83□□□□□ -0.2
VPS37C-202ENST00000535818 C9orf129Q5T035 196 aaKnown RBP13.83□□□□□ -0.2
VPS37C-202ENST00000535818 J3QL48 77 aa13.81□□□□□ -0.2
VPS37C-202ENST00000535818 IGKCP01834 107 aa13.81□□□□□ -0.2
VPS37C-202ENST00000535818 XAGE1AQ9HD64 81 aa13.81□□□□□ -0.2
VPS37C-202ENST00000535818 M0QXV9 152 aa13.8□□□□□ -0.2
VPS37C-202ENST00000535818 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
VPS37C-202ENST00000535818 MYCBP2O75592 4640 aa13.79□□□□□ -0.2
VPS37C-202ENST00000535818 KRTAP29-1A8MX34 341 aaPredicted RBP13.78□□□□□ -0.2
VPS37C-202ENST00000535818 COX17Q14061 63 aa13.78□□□□□ -0.2
VPS37C-202ENST00000535818 PET117Q6UWS5 81 aa13.78□□□□□ -0.2
VPS37C-202ENST00000535818 UBE2BP63146 152 aa13.76□□□□□ -0.21
VPS37C-202ENST00000535818 KRTAP7-1Q8IUC3 87 aa13.76□□□□□ -0.21
VPS37C-202ENST00000535818 PLEKHB2Q96CS7 222 aa13.76□□□□□ -0.21
VPS37C-202ENST00000535818 PSORS1C2Q9UIG4 136 aa13.76□□□□□ -0.21
VPS37C-202ENST00000535818 OXTP01178 125 aa13.75□□□□□ -0.21
VPS37C-202ENST00000535818 S100A6P06703 90 aa13.75□□□□□ -0.21
VPS37C-202ENST00000535818 PFN2P35080 140 aa13.75□□□□□ -0.21
VPS37C-202ENST00000535818 HERV-K104P63124 156 aa13.75□□□□□ -0.21
VPS37C-202ENST00000535818 ERG28Q9UKR5 140 aa13.75□□□□□ -0.21
VPS37C-202ENST00000535818 C20orf202A1L168 122 aa13.74□□□□□ -0.21
VPS37C-202ENST00000535818 LINC00587B1AMM8 73 aa13.74□□□□□ -0.21
VPS37C-202ENST00000535818 AKR1D1P51857 326 aa13.74□□□□□ -0.21
VPS37C-202ENST00000535818 SERTAD4-AS1Q5TG53 156 aa13.74□□□□□ -0.21
VPS37C-202ENST00000535818 ZNF625Q96I27 306 aaPredicted RBP13.74□□□□□ -0.21
VPS37C-202ENST00000535818 PMCHL2Q9BQD1 86 aa13.74□□□□□ -0.21
VPS37C-202ENST00000535818 LEPROTO15243 131 aa13.73□□□□□ -0.21
VPS37C-202ENST00000535818 C1orf137Q5JT78 98 aa13.73□□□□□ -0.21
VPS37C-202ENST00000535818 PKHD1L1Q86WI1 4243 aa13.72□□□□□ -0.21
VPS37C-202ENST00000535818 MYMXA0A1B0GTQ4 84 aa13.72□□□□□ -0.21
VPS37C-202ENST00000535818 S100A2P29034 98 aa13.72□□□□□ -0.21
VPS37C-202ENST00000535818 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
VPS37C-202ENST00000535818 KRTDAPP60985 99 aa13.71□□□□□ -0.21
VPS37C-202ENST00000535818 NDUFA12Q9UI09 145 aa13.71□□□□□ -0.21
VPS37C-202ENST00000535818 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
VPS37C-202ENST00000535818 C3orf79P0CE67 100 aa13.7□□□□□ -0.22
VPS37C-202ENST00000535818 NMUP48645 174 aa13.7□□□□□ -0.22
VPS37C-202ENST00000535818 DMBT1Q9UGM3 2413 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms