RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 Q8IZM0 81 aa8.45□□□□□ -1.06
CAPN1-227ENST00000533909 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
CAPN1-227ENST00000533909 TRGC2P03986 189 aa8.44□□□□□ -1.06
CAPN1-227ENST00000533909 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
CAPN1-227ENST00000533909 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
CAPN1-227ENST00000533909 A0A096LNJ9 63 aa8.43□□□□□ -1.06
CAPN1-227ENST00000533909 HSBP1O75506 76 aa8.43□□□□□ -1.06
CAPN1-227ENST00000533909 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
CAPN1-227ENST00000533909 J3QL48 77 aa8.42□□□□□ -1.06
CAPN1-227ENST00000533909 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
CAPN1-227ENST00000533909 CXCL5P42830 114 aa8.42□□□□□ -1.06
CAPN1-227ENST00000533909 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
CAPN1-227ENST00000533909 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 F8VRH5 84 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 C9orf116Q5BN46 136 aaPredicted RBP8.41□□□□□ -1.06
CAPN1-227ENST00000533909 Q6ZRP5 223 aa8.41□□□□□ -1.06
CAPN1-227ENST00000533909 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
CAPN1-227ENST00000533909 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
CAPN1-227ENST00000533909 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
CAPN1-227ENST00000533909 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
CAPN1-227ENST00000533909 COLCA2A8K830 154 aa8.38□□□□□ -1.07
CAPN1-227ENST00000533909 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
CAPN1-227ENST00000533909 TMEM170BQ5T4T1 132 aa8.38□□□□□ -1.07
CAPN1-227ENST00000533909 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-227ENST00000533909 FAM19A2Q8N3H0 131 aa8.38□□□□□ -1.07
CAPN1-227ENST00000533909 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
CAPN1-227ENST00000533909 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
CAPN1-227ENST00000533909 SERF1AO75920 110 aa8.36□□□□□ -1.07
CAPN1-227ENST00000533909 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
CAPN1-227ENST00000533909 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 H0Y8G0 127 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 SCO1O75880 301 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
CAPN1-227ENST00000533909 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
CAPN1-227ENST00000533909 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-227ENST00000533909 OXTP01178 125 aa8.34□□□□□ -1.07
CAPN1-227ENST00000533909 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
CAPN1-227ENST00000533909 UBE2BP63146 152 aa8.34□□□□□ -1.07
CAPN1-227ENST00000533909 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
CAPN1-227ENST00000533909 HSPB8Q9UJY1 196 aa8.34□□□□□ -1.07
CAPN1-227ENST00000533909 IGLV5-39A0A0G2JS06 123 aa8.33□□□□□ -1.08
CAPN1-227ENST00000533909 M0QXV9 152 aa8.33□□□□□ -1.08
CAPN1-227ENST00000533909 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
CAPN1-227ENST00000533909 FABP4P15090 132 aa8.31□□□□□ -1.08
CAPN1-227ENST00000533909 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
CAPN1-227ENST00000533909 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
CAPN1-227ENST00000533909 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
CAPN1-227ENST00000533909 PFN2P35080 140 aa8.3□□□□□ -1.08
CAPN1-227ENST00000533909 LINC00310P59036 64 aa8.29□□□□□ -1.08
CAPN1-227ENST00000533909 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
CAPN1-227ENST00000533909 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
CAPN1-227ENST00000533909 TMEM223A0PJW6 202 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 PLNP26678 52 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 ODF1Q14990 250 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 REG3GQ6UW15 175 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 ZNF625Q96I27 306 aaPredicted RBP8.28□□□□□ -1.08
CAPN1-227ENST00000533909 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
CAPN1-227ENST00000533909 NUPR1O60356 82 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 S100A1P23297 94 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
CAPN1-227ENST00000533909 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
CAPN1-227ENST00000533909 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
CAPN1-227ENST00000533909 COX17Q14061 63 aa8.26□□□□□ -1.09
CAPN1-227ENST00000533909 DPM2O94777 84 aa8.25□□□□□ -1.09
CAPN1-227ENST00000533909 HERVK_113P61574 105 aa8.25□□□□□ -1.09
CAPN1-227ENST00000533909 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
CAPN1-227ENST00000533909 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
CAPN1-227ENST00000533909 LINC00158P58513 81 aa8.24□□□□□ -1.09
CAPN1-227ENST00000533909 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
CAPN1-227ENST00000533909 HERC1Q15751 4861 aa8.23□□□□□ -1.09
CAPN1-227ENST00000533909 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
CAPN1-227ENST00000533909 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
CAPN1-227ENST00000533909 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
CAPN1-227ENST00000533909 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
CAPN1-227ENST00000533909 MYMXA0A1B0GTQ4 84 aa8.22□□□□□ -1.09
CAPN1-227ENST00000533909 GAGE10A6NGK3 116 aa8.22□□□□□ -1.09
CAPN1-227ENST00000533909 IGKCP01834 107 aa8.22□□□□□ -1.09
CAPN1-227ENST00000533909 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
CAPN1-227ENST00000533909 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
CAPN1-227ENST00000533909 DIRC1Q969H9 104 aa8.22□□□□□ -1.09
CAPN1-227ENST00000533909 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
CAPN1-227ENST00000533909 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms