RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
PACS1-214ENST00000533811 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 PMCHL1Q16048 86 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 C9orf116Q5BN46 136 aaPredicted RBP5.62□□□□□ -1.51
PACS1-214ENST00000533811 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
PACS1-214ENST00000533811 OR5A1Q8NGJ0 315 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 MAP1LC3CQ9BXW4 147 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 LINC00959A0A1B0GUT2 108 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 S100A12P80511 92 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 LINC00518Q8N0U6 118 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
PACS1-214ENST00000533811 IGLV4-69A0A075B6H9 119 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 H7C423 109 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 TSHBP01222 138 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 IGLV7-43P04211 117 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 UBE2D1P51668 147 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 SS18Q15532 418 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 PAPPA-AS1Q5QFB9 102 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 FAM19A2Q8N3H0 131 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 C12orf57Q99622 126 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 CYSLTR1Q9Y271 337 aa5.6□□□□□ -1.51
PACS1-214ENST00000533811 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 A0A087WZ39 114 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 H0Y9J4 135 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 C3orf79P0CE67 100 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
PACS1-214ENST00000533811 MALP21145 153 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 KRTDAPP60985 99 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 PYY3Q5JQD4 70 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 IFI27L1Q96BM0 104 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
PACS1-214ENST00000533811 A0A096LNJ9 63 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.58□□□□□ -1.52
PACS1-214ENST00000533811 SYS1-DBNDD2H3BUS1 97 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 APOMO95445 188 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 SCGB1D1O95968 90 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 CD164L2Q6UWJ8 174 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 ERASQ7Z444 233 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 TMEM141Q96I45 108 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 OPRPNQ99935 248 aaPredicted RBP5.58□□□□□ -1.52
PACS1-214ENST00000533811 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
PACS1-214ENST00000533811 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 LINC01545Q5VT33 79 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 Q6ZN92 141 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 TEX43Q6ZNM6 134 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
PACS1-214ENST00000533811 COX7A2LO14548 114 aa5.56□□□□□ -1.52
PACS1-214ENST00000533811 TSPAN13O95857 204 aa5.56□□□□□ -1.52
PACS1-214ENST00000533811 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
PACS1-214ENST00000533811 HSBP1L1C9JCN9 74 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 TSTD3H0UI37 97 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 PLNP26678 52 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 CTAG1AP78358 180 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
PACS1-214ENST00000533811 MRPL52Q86TS9 123 aaKnown RBP5.55□□□□□ -1.52
PACS1-214ENST00000533811 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
PACS1-214ENST00000533811 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
PACS1-214ENST00000533811 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
PACS1-214ENST00000533811 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
PACS1-214ENST00000533811 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 C2orf48Q96LS8 159 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 CDC42SE2Q9NRR3 84 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 UBE2D4Q9Y2X8 147 aa5.54□□□□□ -1.52
PACS1-214ENST00000533811 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
PACS1-214ENST00000533811 IGIPA6NJ69 53 aa5.53□□□□□ -1.52
PACS1-214ENST00000533811 F8VRH5 84 aa5.53□□□□□ -1.52
PACS1-214ENST00000533811 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
PACS1-214ENST00000533811 UBE2BP63146 152 aa5.53□□□□□ -1.52
PACS1-214ENST00000533811 MRPS36P82909 103 aaKnown RBP5.53□□□□□ -1.52
PACS1-214ENST00000533811 DPM2O94777 84 aa5.52□□□□□ -1.53
PACS1-214ENST00000533811 PMVKQ15126 192 aa5.52□□□□□ -1.53
PACS1-214ENST00000533811 M0QXV9 152 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 IGKCP01834 107 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 SEC11AP67812 179 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 GAGE2EQ4V326 116 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 LINC00173Q6ZV60 143 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 C2orf88Q9BSF0 95 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 VCX2Q9H322 139 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 GAGE2DQ9UEU5 116 aa5.51□□□□□ -1.53
PACS1-214ENST00000533811 RNF151Q2KHN1 245 aa5.5□□□□□ -1.53
PACS1-214ENST00000533811 PMCHL2Q9BQD1 86 aa5.5□□□□□ -1.53
PACS1-214ENST00000533811 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
PACS1-214ENST00000533811 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 H0Y8G0 127 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 NDUFA1O15239 70 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms