RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 FABP4P15090 132 aa12.65□□□□□ -0.38
CHEK1-215ENST00000533778 CXCL5P42830 114 aa12.65□□□□□ -0.38
CHEK1-215ENST00000533778 F8VRH5 84 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 PANO1I0J062 215 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 SPINK8P0C7L1 97 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 CHTF8P0CG12 524 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-215ENST00000533778 MAJINQ3KP22 176 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
CHEK1-215ENST00000533778 A0A096LNI7 61 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
CHEK1-215ENST00000533778 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 COX7B2Q8TF08 81 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 C6orf48Q9UBA6 75 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 HSPG2P98160 4391 aa12.63□□□□□ -0.39
CHEK1-215ENST00000533778 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
CHEK1-215ENST00000533778 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
CHEK1-215ENST00000533778 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
CHEK1-215ENST00000533778 COA6Q5JTJ3 125 aaKnown RBP12.62□□□□□ -0.39
CHEK1-215ENST00000533778 H0Y8G0 127 aa12.61□□□□□ -0.39
CHEK1-215ENST00000533778 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
CHEK1-215ENST00000533778 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
CHEK1-215ENST00000533778 MAP1LC3CQ9BXW4 147 aa12.61□□□□□ -0.39
CHEK1-215ENST00000533778 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
CHEK1-215ENST00000533778 A0A087WYN8 130 aa12.6□□□□□ -0.39
CHEK1-215ENST00000533778 IGLV5-39A0A0G2JS06 123 aa12.59□□□□□ -0.39
CHEK1-215ENST00000533778 ODF1Q14990 250 aa12.59□□□□□ -0.39
CHEK1-215ENST00000533778 STPG4Q8N801 248 aa12.59□□□□□ -0.39
CHEK1-215ENST00000533778 PLAC8Q9NZF1 115 aa12.59□□□□□ -0.39
CHEK1-215ENST00000533778 Q5VSD8 79 aa12.58□□□□□ -0.4
CHEK1-215ENST00000533778 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
CHEK1-215ENST00000533778 NDUFC2-KCTD14E9PQ53 114 aa12.57□□□□□ -0.4
CHEK1-215ENST00000533778 PLNP26678 52 aa12.57□□□□□ -0.4
CHEK1-215ENST00000533778 PLA2G1BP04054 148 aaKnown RBP12.56□□□□□ -0.4
CHEK1-215ENST00000533778 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
CHEK1-215ENST00000533778 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
CHEK1-215ENST00000533778 Q6ZRP5 223 aa12.55□□□□□ -0.4
CHEK1-215ENST00000533778 KRTAP17-1Q9BYP8 105 aa12.55□□□□□ -0.4
CHEK1-215ENST00000533778 DPM2O94777 84 aa12.53□□□□□ -0.4
CHEK1-215ENST00000533778 GAGE2EQ4V326 116 aa12.53□□□□□ -0.4
CHEK1-215ENST00000533778 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
CHEK1-215ENST00000533778 GAGE2DQ9UEU5 116 aa12.53□□□□□ -0.4
CHEK1-215ENST00000533778 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
CHEK1-215ENST00000533778 IGKCP01834 107 aa12.51□□□□□ -0.41
CHEK1-215ENST00000533778 C7orf33Q8WU49 177 aa12.51□□□□□ -0.41
CHEK1-215ENST00000533778 KRTAP4-5Q9BYR2 181 aa12.5□□□□□ -0.41
CHEK1-215ENST00000533778 HERVK_113P61574 105 aa12.49□□□□□ -0.41
CHEK1-215ENST00000533778 PET117Q6UWS5 81 aa12.49□□□□□ -0.41
CHEK1-215ENST00000533778 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
CHEK1-215ENST00000533778 A0A1W2PNN7 141 aa12.47□□□□□ -0.41
CHEK1-215ENST00000533778 S100A6P06703 90 aa12.47□□□□□ -0.41
CHEK1-215ENST00000533778 RPL37AP61513 92 aaKnown RBP12.47□□□□□ -0.41
CHEK1-215ENST00000533778 COX17Q14061 63 aa12.45□□□□□ -0.42
CHEK1-215ENST00000533778 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
CHEK1-215ENST00000533778 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
CHEK1-215ENST00000533778 C3orf79P0CE67 100 aa12.44□□□□□ -0.42
CHEK1-215ENST00000533778 KRTDAPP60985 99 aa12.44□□□□□ -0.42
CHEK1-215ENST00000533778 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
CHEK1-215ENST00000533778 ERG28Q9UKR5 140 aa12.44□□□□□ -0.42
CHEK1-215ENST00000533778 LEPROTO15243 131 aa12.43□□□□□ -0.42
CHEK1-215ENST00000533778 S100A2P29034 98 aa12.43□□□□□ -0.42
CHEK1-215ENST00000533778 C9orf129Q5T035 196 aaKnown RBP12.43□□□□□ -0.42
CHEK1-215ENST00000533778 C20orf202A1L168 122 aa12.42□□□□□ -0.42
CHEK1-215ENST00000533778 INAFM2P0DMQ5 153 aa12.42□□□□□ -0.42
CHEK1-215ENST00000533778 PFN2P35080 140 aa12.42□□□□□ -0.42
CHEK1-215ENST00000533778 HERV-K104P63124 156 aa12.42□□□□□ -0.42
CHEK1-215ENST00000533778 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
CHEK1-215ENST00000533778 MYMXA0A1B0GTQ4 84 aa12.41□□□□□ -0.42
CHEK1-215ENST00000533778 FAM168BA1KXE4 195 aa12.41□□□□□ -0.42
CHEK1-215ENST00000533778 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
CHEK1-215ENST00000533778 FAM19A5Q7Z5A7 132 aaPredicted RBP12.41□□□□□ -0.42
CHEK1-215ENST00000533778 FAT1Q14517 4588 aa12.41□□□□□ -0.42
CHEK1-215ENST00000533778 AKR1D1P51857 326 aa12.4□□□□□ -0.42
CHEK1-215ENST00000533778 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.42
CHEK1-215ENST00000533778 NDUFA12Q9UI09 145 aa12.4□□□□□ -0.42
CHEK1-215ENST00000533778 J3QQQ9 107 aa12.38□□□□□ -0.43
CHEK1-215ENST00000533778 LGALS3P17931 250 aaKnown RBP12.38□□□□□ -0.43
CHEK1-215ENST00000533778 NMUP48645 174 aa12.38□□□□□ -0.43
CHEK1-215ENST00000533778 E9PLD3 99 aa12.37□□□□□ -0.43
CHEK1-215ENST00000533778 M0QXV9 152 aa12.37□□□□□ -0.43
CHEK1-215ENST00000533778 LINC00158P58513 81 aa12.37□□□□□ -0.43
CHEK1-215ENST00000533778 KRTAP10-4P60372 401 aaPredicted RBP12.37□□□□□ -0.43
CHEK1-215ENST00000533778 PHF5AQ7RTV0 110 aaKnown RBP12.37□□□□□ -0.43
CHEK1-215ENST00000533778 PCLOQ9Y6V0 5065 aa12.37□□□□□ -0.43
CHEK1-215ENST00000533778 ABCA13Q86UQ4 5058 aa12.36□□□□□ -0.43
CHEK1-215ENST00000533778 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
CHEK1-215ENST00000533778 HIST1H2BLQ99880 126 aa12.36□□□□□ -0.43
CHEK1-215ENST00000533778 PLA2G2DQ9UNK4 145 aa12.36□□□□□ -0.43
CHEK1-215ENST00000533778 LBHQ53QV2 105 aaPredicted RBP12.35□□□□□ -0.43
CHEK1-215ENST00000533778 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
CHEK1-215ENST00000533778 SNRPEP62304 92 aaKnown RBP12.34□□□□□ -0.43
CHEK1-215ENST00000533778 PRR3P79522 188 aaKnown RBP12.34□□□□□ -0.43
CHEK1-215ENST00000533778 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
CHEK1-215ENST00000533778 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
CHEK1-215ENST00000533778 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
CHEK1-215ENST00000533778 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
CHEK1-215ENST00000533778 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms