RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
PKP3-209ENST00000533069 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
PKP3-209ENST00000533069 XCL1P47992 114 aa10.7□□□□□ -0.7
PKP3-209ENST00000533069 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
PKP3-209ENST00000533069 SLPIP03973 132 aa10.69□□□□□ -0.7
PKP3-209ENST00000533069 HERVK_113P61574 105 aa10.69□□□□□ -0.7
PKP3-209ENST00000533069 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
PKP3-209ENST00000533069 HIGD2BQ4VC39 106 aa10.68□□□□□ -0.7
PKP3-209ENST00000533069 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
PKP3-209ENST00000533069 LINC00469Q8N7U9 141 aa10.68□□□□□ -0.7
PKP3-209ENST00000533069 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
PKP3-209ENST00000533069 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
PKP3-209ENST00000533069 IGHV3OR16-9A0A0B4J2B5 98 aa10.67□□□□□ -0.7
PKP3-209ENST00000533069 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
PKP3-209ENST00000533069 ZNF22P17026 224 aaPredicted RBP10.67□□□□□ -0.7
PKP3-209ENST00000533069 CIRBPQ14011 172 aaKnown RBP10.67□□□□□ -0.7
PKP3-209ENST00000533069 PMCHL2Q9BQD1 86 aa10.67□□□□□ -0.7
PKP3-209ENST00000533069 A0A087WZ39 114 aa10.66□□□□□ -0.7
PKP3-209ENST00000533069 COX7A2LO14548 114 aa10.66□□□□□ -0.7
PKP3-209ENST00000533069 APOMO95445 188 aa10.66□□□□□ -0.7
PKP3-209ENST00000533069 S100A12P80511 92 aa10.66□□□□□ -0.7
PKP3-209ENST00000533069 PANO1I0J062 215 aa10.64□□□□□ -0.71
PKP3-209ENST00000533069 VAMP8Q9BV40 100 aa10.64□□□□□ -0.71
PKP3-209ENST00000533069 CDKN2A-AS1Q9UH64 79 aa10.64□□□□□ -0.71
PKP3-209ENST00000533069 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
PKP3-209ENST00000533069 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
PKP3-209ENST00000533069 MALP21145 153 aa10.63□□□□□ -0.71
PKP3-209ENST00000533069 COX6A2Q02221 97 aa10.63□□□□□ -0.71
PKP3-209ENST00000533069 E9PLD3 99 aa10.62□□□□□ -0.71
PKP3-209ENST00000533069 KRTAP10-4P60372 401 aaPredicted RBP10.62□□□□□ -0.71
PKP3-209ENST00000533069 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PKP3-209ENST00000533069 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
PKP3-209ENST00000533069 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
PKP3-209ENST00000533069 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
PKP3-209ENST00000533069 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
PKP3-209ENST00000533069 ATOH7Q8N100 152 aa10.61□□□□□ -0.71
PKP3-209ENST00000533069 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
PKP3-209ENST00000533069 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
PKP3-209ENST00000533069 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
PKP3-209ENST00000533069 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
PKP3-209ENST00000533069 HERC1Q15751 4861 aa10.6□□□□□ -0.71
PKP3-209ENST00000533069 A0A087WYN8 130 aa10.59□□□□□ -0.71
PKP3-209ENST00000533069 IGLV5-39A0A0G2JS06 123 aa10.59□□□□□ -0.71
PKP3-209ENST00000533069 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
PKP3-209ENST00000533069 CARD19Q96LW7 228 aa10.59□□□□□ -0.71
PKP3-209ENST00000533069 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
PKP3-209ENST00000533069 F8WDY8 70 aa10.58□□□□□ -0.72
PKP3-209ENST00000533069 LEPROTO15243 131 aa10.58□□□□□ -0.72
PKP3-209ENST00000533069 NMUP48645 174 aa10.58□□□□□ -0.72
PKP3-209ENST00000533069 STPG4Q8N801 248 aa10.58□□□□□ -0.72
PKP3-209ENST00000533069 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
PKP3-209ENST00000533069 PRSS2P07478 247 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 SPINK8P0C7L1 97 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 CXCL5P42830 114 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 Q8IZM0 81 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 LINC00526Q96FQ7 95 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 LINC00474Q9P2X8 69 aa10.57□□□□□ -0.72
PKP3-209ENST00000533069 SPATA45Q537H7 98 aa10.56□□□□□ -0.72
PKP3-209ENST00000533069 C12orf57Q99622 126 aa10.56□□□□□ -0.72
PKP3-209ENST00000533069 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 KRTAP29-1A8MX34 341 aaPredicted RBP10.55□□□□□ -0.72
PKP3-209ENST00000533069 J3QL48 77 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 J3QQQ9 107 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
PKP3-209ENST00000533069 MAJINQ3KP22 176 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 PAM16Q9Y3D7 125 aa10.55□□□□□ -0.72
PKP3-209ENST00000533069 A0A096LNI7 61 aa10.54□□□□□ -0.72
PKP3-209ENST00000533069 LINC00518Q8N0U6 118 aa10.54□□□□□ -0.72
PKP3-209ENST00000533069 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
PKP3-209ENST00000533069 ANKRD39Q53RE8 183 aa10.53□□□□□ -0.72
PKP3-209ENST00000533069 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
PKP3-209ENST00000533069 C7orf33Q8WU49 177 aa10.53□□□□□ -0.72
PKP3-209ENST00000533069 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
PKP3-209ENST00000533069 DLEU1O43261 78 aa10.52□□□□□ -0.73
PKP3-209ENST00000533069 HERV-K104P63124 156 aa10.52□□□□□ -0.73
PKP3-209ENST00000533069 SPAG11BQ08648 103 aa10.52□□□□□ -0.73
PKP3-209ENST00000533069 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 LINC00587B1AMM8 73 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 COX8AP10176 69 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 CKS1BP61024 79 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 Q6ZRU5 148 aa10.51□□□□□ -0.73
PKP3-209ENST00000533069 NDUFA1O15239 70 aa10.5□□□□□ -0.73
PKP3-209ENST00000533069 OXTP01178 125 aa10.5□□□□□ -0.73
PKP3-209ENST00000533069 TOMM7Q9P0U1 55 aa10.5□□□□□ -0.73
PKP3-209ENST00000533069 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
PKP3-209ENST00000533069 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
PKP3-209ENST00000533069 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
PKP3-209ENST00000533069 TSTD3H0UI37 97 aa10.48□□□□□ -0.73
PKP3-209ENST00000533069 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
PKP3-209ENST00000533069 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
PKP3-209ENST00000533069 RNF151Q2KHN1 245 aa10.48□□□□□ -0.73
PKP3-209ENST00000533069 BOD1L2Q8IYS8 172 aa10.48□□□□□ -0.73
PKP3-209ENST00000533069 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
PKP3-209ENST00000533069 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
PKP3-209ENST00000533069 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
PKP3-209ENST00000533069 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms