RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CRPP02741 224 aa4.53□□□□□ -1.69
TRIM53CP-201ENST00000531490 MIAQ16674 131 aa4.53□□□□□ -1.69
TRIM53CP-201ENST00000531490 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
TRIM53CP-201ENST00000531490 PRSS1P07477 247 aa4.52□□□□□ -1.69
TRIM53CP-201ENST00000531490 FGF6P10767 208 aa4.52□□□□□ -1.69
TRIM53CP-201ENST00000531490 DDTP30046 118 aa4.52□□□□□ -1.69
TRIM53CP-201ENST00000531490 LINC01545Q5VT33 79 aa4.52□□□□□ -1.69
TRIM53CP-201ENST00000531490 A0A096LNJ9 63 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 OXTP01178 125 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 AMMECR1LQ6DCA0 310 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 Q6ZN92 141 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 Q6ZSA8 131 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 TOMM6Q96B49 74 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 PAM16Q9Y3D7 125 aa4.51□□□□□ -1.69
TRIM53CP-201ENST00000531490 TRAV8-4A0A0B4J246 113 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 H7C423 109 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 SMAGPQ0VAQ4 97 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 PAPPA-AS1Q5QFB9 102 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 ERASQ7Z444 233 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 MRPL52Q86TS9 123 aaKnown RBP4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 MIEN1Q9BRT3 115 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 PRO1933Q9H354 126 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 UQCR10Q9UDW1 63 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
TRIM53CP-201ENST00000531490 TRAV12-1A0A0B4J245 112 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 H0Y8G0 127 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 RPL39P62891 51 aaKnown RBP4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 C2orf66Q6UXQ4 117 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 LINC00173Q6ZV60 143 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 FAM104AQ969W3 186 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
TRIM53CP-201ENST00000531490 TNXBP22105 4242 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 IGKCP01834 107 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 PLNP26678 52 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 OR5A1Q8NGJ0 315 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 OPRPNQ99935 248 aaPredicted RBP4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
TRIM53CP-201ENST00000531490 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 LINC00587B1AMM8 73 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 PANO1I0J062 215 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 CCL25O15444 150 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 DPM2O94777 84 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 ZNF25P17030 456 aaPredicted RBP4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 XCL1P47992 114 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 DGAT2L7PQ6IED9 249 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 C15orf56Q8N910 161 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 C9orf163Q8N9P6 203 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
TRIM53CP-201ENST00000531490 F8VRH5 84 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 HIGD2BQ4VC39 106 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 SLC25A34Q6PIV7 304 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 SDIM1Q6ZPB5 146 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 ATOH7Q8N100 152 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 CHAC1Q9BUX1 264 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 PYGO1Q9Y3Y4 419 aa4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 CSDC2Q9Y534 153 aaKnown RBP4.46□□□□□ -1.7
TRIM53CP-201ENST00000531490 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 M0R143 59 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 PCP4P48539 62 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 CTAG1AP78358 180 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 PMVKQ15126 192 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 Q6ZUT4 128 aa4.45□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 DLEU1O43261 78 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 COX8AP10176 69 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 SS18Q15532 418 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 CD164L2Q6UWJ8 174 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 PRR26Q8N8Z3 221 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 TIMM21Q9BVV7 248 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 SPANXA1Q9NS26 97 aa4.44□□□□□ -1.7
TRIM53CP-201ENST00000531490 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
TRIM53CP-201ENST00000531490 HERVK_113P61574 105 aa4.43□□□□□ -1.7
TRIM53CP-201ENST00000531490 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
TRIM53CP-201ENST00000531490 VCX2Q9H322 139 aa4.43□□□□□ -1.7
TRIM53CP-201ENST00000531490 MRPL35Q9NZE8 188 aaKnown RBP4.43□□□□□ -1.7
TRIM53CP-201ENST00000531490 GVQW2A0A096LPI5 108 aaPredicted RBP4.42□□□□□ -1.7
TRIM53CP-201ENST00000531490 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
TRIM53CP-201ENST00000531490 COX6A2Q02221 97 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms