RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LINC01551Q86U37 167 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 GATD1Q8NB37 220 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 BTF3L4Q96K17 158 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 CARD19Q96LW7 228 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 CNFNQ9BYD5 112 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
CSDE1-213ENST00000530784 IGHV1-58A0A0C4DH39 117 aa3.93□□□□□ -1.78
CSDE1-213ENST00000530784 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
CSDE1-213ENST00000530784 CCL25O15444 150 aa3.93□□□□□ -1.78
CSDE1-213ENST00000530784 BCL2P10415 239 aa3.93□□□□□ -1.78
CSDE1-213ENST00000530784 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
CSDE1-213ENST00000530784 RPL39LQ96EH5 51 aaKnown RBP3.93□□□□□ -1.78
CSDE1-213ENST00000530784 LINC00959A0A1B0GUT2 108 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 I3L3M4 83 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 SS18Q15532 418 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 LINC00526Q96FQ7 95 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 MRAP2Q96G30 205 aa3.92□□□□□ -1.78
CSDE1-213ENST00000530784 RNASE7Q9H1E1 156 aaKnown RBP3.92□□□□□ -1.78
CSDE1-213ENST00000530784 TRBV6-5A0A0K0K1A5 114 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 K7EN84 100 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 PMCHP20382 165 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 TAGLN2P37802 199 aaKnown RBP3.91□□□□□ -1.78
CSDE1-213ENST00000530784 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-213ENST00000530784 SYCNQ0VAF6 134 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 ISOC2Q96AB3 205 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 BORCS7Q96B45 105 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 TMEM242Q9NWH2 141 aa3.91□□□□□ -1.78
CSDE1-213ENST00000530784 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 GATCO43716 136 aaKnown RBP3.9□□□□□ -1.79
CSDE1-213ENST00000530784 ATP5LO75964 103 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 ESDP10768 282 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 S100A1P23297 94 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 UQCC3Q6UW78 93 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 MRPL52Q86TS9 123 aaKnown RBP3.9□□□□□ -1.79
CSDE1-213ENST00000530784 SLC7A5P1Q8MH63 180 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 FAM210AQ96ND0 272 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 ST20Q9HBF5 79 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 LRP2P98164 4655 aa3.9□□□□□ -1.79
CSDE1-213ENST00000530784 IGLV4-69A0A075B6H9 119 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 C7orf77A4D0Y5 90 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 A8MWL6 223 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 COX7A2LO14548 114 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 FAM231DQ6ZW35 169 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 COMMD7Q86VX2 200 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 ZNF664Q8N3J9 261 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 CAMK2N2Q96S95 79 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 SMDT1Q9H4I9 107 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
CSDE1-213ENST00000530784 IGKV2-28A0A075B6P5 120 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 TRBV27A0A0K0K1C4 114 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 C1orf196B1AJZ1 125 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 APOMO95445 188 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 IGKV2D-28P01615 120 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 MT-ND6P03923 174 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 FCER1GP30273 86 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 NMUP48645 174 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 RPL18AQ02543 176 aaKnown RBP3.88□□□□□ -1.79
CSDE1-213ENST00000530784 SMAGPQ0VAQ4 97 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
CSDE1-213ENST00000530784 TNXBP22105 4242 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 TMEM250H0YL14 139 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-213ENST00000530784 CEBPGP53567 150 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 POLR2KP53803 58 aaKnown RBP3.87□□□□□ -1.79
CSDE1-213ENST00000530784 C9orf116Q5BN46 136 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-213ENST00000530784 C1orf137Q5JT78 98 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 C10orf91Q5T1B1 145 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 AMN1Q8IY45 258 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
CSDE1-213ENST00000530784 A0A096LNJ9 63 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 HIGD1CA8MV81 97 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 RAB4AP20338 218 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 SPAG11BQ08648 103 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 KIAA0087Q14695 138 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
CSDE1-213ENST00000530784 PHF5AQ7RTV0 110 aaKnown RBP3.86□□□□□ -1.79
CSDE1-213ENST00000530784 TSKUQ8WUA8 353 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
CSDE1-213ENST00000530784 CSDC2Q9Y534 153 aaKnown RBP3.86□□□□□ -1.79
CSDE1-213ENST00000530784 TMEM218A2RU14 115 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 SMKR1H3BMG3 65 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 PPP1R17O96001 155 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 PEA15Q15121 130 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 Q6ZUT4 128 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 C5orf38Q86SI9 138 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 OR10D4PQ8NGN7 298 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 SEC11CQ9BY50 192 aa3.85□□□□□ -1.79
CSDE1-213ENST00000530784 CARHSP1Q9Y2V2 147 aaKnown RBP3.85□□□□□ -1.79
CSDE1-213ENST00000530784 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 C9JQL5 133 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 PPP1R2P9O14990 202 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms