RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 PDE6DO43924 150 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 MGPP08493 103 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 TRGC1P0CF51 173 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 GZMBP10144 247 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 GNG4P50150 75 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 UBE2D3P61077 147 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 UBE2D2P62837 147 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 FER1L6-AS1Q8NA97 138 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 MBD3L1Q8WWY6 194 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 BORCS7Q96B45 105 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 SMIM12Q96EX1 92 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 GNG13Q9P2W3 67 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 CARHSP1Q9Y2V2 147 aaKnown RBP2.85□□□□□ -1.95
VPS26B-205ENST00000530402 TRAPPC1Q9Y5R8 145 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
VPS26B-205ENST00000530402 DNAH6Q9C0G6 4158 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 DNAH11Q96DT5 4516 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 A0A1B0GVG6 124 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 S100A1P23297 94 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 RPL35P42766 123 aaKnown RBP2.84□□□□□ -1.95
VPS26B-205ENST00000530402 SULT1A2P50226 295 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 AMMECR1LQ6DCA0 310 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 TEX261Q6UWH6 196 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 OR2D3Q8NGH3 330 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 BTF3L4Q96K17 158 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 PKIGQ9Y2B9 76 aa2.84□□□□□ -1.95
VPS26B-205ENST00000530402 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
VPS26B-205ENST00000530402 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 K7ERS5 55 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 LINC00694P0DN24 101 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 CCL20P78556 96 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 HAMPP81172 84 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 RPL19P84098 196 aaKnown RBP2.83□□□□□ -1.96
VPS26B-205ENST00000530402 COTL1Q14019 142 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 NDUFA5Q16718 116 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 RASL11AQ6T310 242 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 LINC00269Q8N2A0 174 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 OR10AG1Q8NH19 301 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 YPEL4Q96NS1 127 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 NIT2Q9NQR4 276 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
VPS26B-205ENST00000530402 DYNC1H1Q14204 4646 aaKnown RBP2.82□□□□□ -1.96
VPS26B-205ENST00000530402 TRAV1-1A0A0B4J248 108 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 H3BQ85 93 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 SMLR1H3BR10 107 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 NKX2-5P52952 324 aaPredicted RBP2.82□□□□□ -1.96
VPS26B-205ENST00000530402 SMAGPQ0VAQ4 97 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 IQCJQ1A5X6 159 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 TMEM241Q24JQ0 296 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 ENHOQ6UWT2 76 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 SCXQ7RTU7 201 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 AMN1Q8IY45 258 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 ANAPC13Q9BS18 74 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 MUC4Q99102 2169 aa2.82□□□□□ -1.96
VPS26B-205ENST00000530402 IGLV10-54A0A075B6I4 117 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 IGHV3-64A0A075B6Q5 118 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 M0QY20 66 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 NCR2O95944 276 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 PPP1R17O96001 155 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 SCGB1C2P0DMR2 95 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 RPL37AP61513 92 aaKnown RBP2.81□□□□□ -1.96
VPS26B-205ENST00000530402 WFDC2Q14508 124 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 CLPSL2Q6UWE3 100 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 LYZL1Q6UWQ5 148 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 Q6ZSA8 131 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 SLC51BQ86UW2 128 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 C9orf62Q8N4C0 152 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 C9orf163Q8N9P6 203 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 PKD1P98161 4303 aa2.81□□□□□ -1.96
VPS26B-205ENST00000530402 RYR1P21817 5038 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 IGKV3OR2-268A0A0C4DH90 116 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 RAB19A4D1S5 217 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 BCL2P10415 239 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 CEBPGP53567 150 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 EIF5A2Q9GZV4 153 aaKnown RBP2.8□□□□□ -1.96
VPS26B-205ENST00000530402 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
VPS26B-205ENST00000530402 C19orf71A6NCJ1 209 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 G3V3Q6 166 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 I3L3M4 83 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 IGLC6P0CF74 106 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
VPS26B-205ENST00000530402 FCER1GP30273 86 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 CNBPP62633 177 aaKnown RBP2.79□□□□□ -1.96
VPS26B-205ENST00000530402 SS18Q15532 418 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 MRAP2Q96G30 205 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 ST20Q9HBF5 79 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 HSPG2P98160 4391 aa2.79□□□□□ -1.96
VPS26B-205ENST00000530402 TMEM250H0YL14 139 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 CCL25O15444 150 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 NDUFS6O75380 124 aaKnown RBP2.78□□□□□ -1.96
VPS26B-205ENST00000530402 VAMP3Q15836 100 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 SDIM1Q6ZPB5 146 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms