RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PAM16Q9Y3D7 125 aa6.98□□□□□ -1.29
PVT1-216ENST00000523068 CSDC2Q9Y534 153 aaKnown RBP6.98□□□□□ -1.29
PVT1-216ENST00000523068 SS18Q15532 418 aa6.97□□□□□ -1.29
PVT1-216ENST00000523068 Q6ZUT4 128 aa6.97□□□□□ -1.29
PVT1-216ENST00000523068 GVQW2A0A096LPI5 108 aaPredicted RBP6.96□□□□□ -1.3
PVT1-216ENST00000523068 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 PANO1I0J062 215 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 OXTP01178 125 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 XCL1P47992 114 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 HERVK_113P61574 105 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 FOXI1Q12951 378 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 ZNF664Q8N3J9 261 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
PVT1-216ENST00000523068 CCL25O15444 150 aa6.95□□□□□ -1.3
PVT1-216ENST00000523068 SEC11AP67812 179 aa6.95□□□□□ -1.3
PVT1-216ENST00000523068 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
PVT1-216ENST00000523068 AMELXQ99217 191 aa6.95□□□□□ -1.3
PVT1-216ENST00000523068 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
PVT1-216ENST00000523068 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
PVT1-216ENST00000523068 COX6A2Q02221 97 aa6.94□□□□□ -1.3
PVT1-216ENST00000523068 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
PVT1-216ENST00000523068 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
PVT1-216ENST00000523068 A0A087WYN8 130 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 CHTF8P0CG12 524 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
PVT1-216ENST00000523068 TMEM170BQ5T4T1 132 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
PVT1-216ENST00000523068 GEMIN7Q9H840 131 aaKnown RBP6.93□□□□□ -1.3
PVT1-216ENST00000523068 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 PCP4L1A6NKN8 68 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 HERVK_113P63121 156 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 UQCR10Q9UDW1 63 aa6.92□□□□□ -1.3
PVT1-216ENST00000523068 TRAV13-1A0A0B4J241 112 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 H3BRM9 83 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 MALP21145 153 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 UBE2D1P51668 147 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 STPG4Q8N801 248 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
PVT1-216ENST00000523068 COX7A2LO14548 114 aa6.9□□□□□ -1.3
PVT1-216ENST00000523068 NMUP48645 174 aa6.9□□□□□ -1.3
PVT1-216ENST00000523068 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
PVT1-216ENST00000523068 SLC25A34Q6PIV7 304 aa6.9□□□□□ -1.3
PVT1-216ENST00000523068 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
PVT1-216ENST00000523068 PKHD1L1Q86WI1 4243 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
PVT1-216ENST00000523068 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
PVT1-216ENST00000523068 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 Q6ZRU5 148 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 FAM104AQ969W3 186 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
PVT1-216ENST00000523068 A0A096LNI7 61 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 E9PLD3 99 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 APOMO95445 188 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 COX8AP10176 69 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 DDTP30046 118 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
PVT1-216ENST00000523068 LRP1Q07954 4544 aaKnown RBP6.87□□□□□ -1.31
PVT1-216ENST00000523068 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
PVT1-216ENST00000523068 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
PVT1-216ENST00000523068 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
PVT1-216ENST00000523068 PLEKHB2Q96CS7 222 aa6.87□□□□□ -1.31
PVT1-216ENST00000523068 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 LOC107984640A0A0U1RRK4 108 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 LEPROTO15243 131 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
PVT1-216ENST00000523068 DLEU1O43261 78 aa6.85□□□□□ -1.31
PVT1-216ENST00000523068 C5orf38Q86SI9 138 aa6.85□□□□□ -1.31
PVT1-216ENST00000523068 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 J3QQQ9 107 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 PTTG1IPP53801 180 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
PVT1-216ENST00000523068 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 F8WDY8 70 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
PVT1-216ENST00000523068 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
PVT1-216ENST00000523068 PRR3P79522 188 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms