RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 Q6ZRU5 148 aa11.55□□□□□ -0.56
SDC2-205ENST00000520233 DNAH17Q9UFH2 4485 aa11.54□□□□□ -0.56
SDC2-205ENST00000520233 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.565e-6■■□□□ 13.6
SDC2-205ENST00000520233 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
SDC2-205ENST00000520233 J3QQQ9 107 aa11.53□□□□□ -0.56
SDC2-205ENST00000520233 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
SDC2-205ENST00000520233 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
SDC2-205ENST00000520233 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
SDC2-205ENST00000520233 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.57
SDC2-205ENST00000520233 TSPEAR-AS2P59090 65 aa11.52□□□□□ -0.57
SDC2-205ENST00000520233 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
SDC2-205ENST00000520233 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
SDC2-205ENST00000520233 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
SDC2-205ENST00000520233 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
SDC2-205ENST00000520233 ANKRD39Q53RE8 183 aa11.51□□□□□ -0.57
SDC2-205ENST00000520233 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
SDC2-205ENST00000520233 C6orf48Q9UBA6 75 aa11.51□□□□□ -0.57
SDC2-205ENST00000520233 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
SDC2-205ENST00000520233 NDUFA12Q9UI09 145 aa11.5□□□□□ -0.57
SDC2-205ENST00000520233 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
SDC2-205ENST00000520233 NMUP48645 174 aa11.49□□□□□ -0.57
SDC2-205ENST00000520233 MYMXA0A1B0GTQ4 84 aa11.48□□□□□ -0.57
SDC2-205ENST00000520233 GCSHP23434 173 aa11.48□□□□□ -0.57
SDC2-205ENST00000520233 HERV-K104P63124 156 aa11.48□□□□□ -0.57
SDC2-205ENST00000520233 LINC01620Q4KN68 170 aa11.47□□□□□ -0.57
SDC2-205ENST00000520233 PKIGQ9Y2B9 76 aa11.47□□□□□ -0.57
SDC2-205ENST00000520233 FAT2Q9NYQ8 4349 aa11.47□□□□□ -0.57
SDC2-205ENST00000520233 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.57
SDC2-205ENST00000520233 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
SDC2-205ENST00000520233 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
SDC2-205ENST00000520233 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
SDC2-205ENST00000520233 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
SDC2-205ENST00000520233 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
SDC2-205ENST00000520233 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
SDC2-205ENST00000520233 TTTY13Q9BZ97 58 aa11.43□□□□□ -0.58
SDC2-205ENST00000520233 ERG28Q9UKR5 140 aa11.43□□□□□ -0.58
SDC2-205ENST00000520233 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
SDC2-205ENST00000520233 KRTAP10-1P60331 282 aa11.42□□□□□ -0.58
SDC2-205ENST00000520233 COX17Q14061 63 aa11.42□□□□□ -0.58
SDC2-205ENST00000520233 PAM16Q9Y3D7 125 aa11.42□□□□□ -0.58
SDC2-205ENST00000520233 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
SDC2-205ENST00000520233 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
SDC2-205ENST00000520233 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
SDC2-205ENST00000520233 MEIG1Q5JSS6 88 aa11.41□□□□□ -0.58
SDC2-205ENST00000520233 PCP2Q8IVA1 136 aa11.41□□□□□ -0.58
SDC2-205ENST00000520233 PFN2P35080 140 aa11.4□□□□□ -0.58
SDC2-205ENST00000520233 Q6ZRP5 223 aa11.4□□□□□ -0.58
SDC2-205ENST00000520233 A0A096LNI7 61 aa11.39□□□□□ -0.59
SDC2-205ENST00000520233 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
SDC2-205ENST00000520233 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 SMIM6P0DI80 62 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 SMIM13P0DJ93 91 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 LINC00158P58513 81 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 PKD1P98161 4303 aa11.38□□□□□ -0.59
SDC2-205ENST00000520233 COX8AP10176 69 aa11.37□□□□□ -0.59
SDC2-205ENST00000520233 S100A12P80511 92 aa11.37□□□□□ -0.59
SDC2-205ENST00000520233 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
SDC2-205ENST00000520233 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
SDC2-205ENST00000520233 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
SDC2-205ENST00000520233 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
SDC2-205ENST00000520233 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 TIMM17BO60830 172 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 Q6ZSA8 131 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
SDC2-205ENST00000520233 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.35□□□□□ -0.59
SDC2-205ENST00000520233 PANO1I0J062 215 aa11.34□□□□□ -0.59
SDC2-205ENST00000520233 DLEU1O43261 78 aa11.34□□□□□ -0.59
SDC2-205ENST00000520233 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
SDC2-205ENST00000520233 C14orf144Q96I85 54 aa11.34□□□□□ -0.59
SDC2-205ENST00000520233 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
SDC2-205ENST00000520233 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
SDC2-205ENST00000520233 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
SDC2-205ENST00000520233 LITAFQ99732 161 aa11.32□□□□□ -0.6
SDC2-205ENST00000520233 SND1-IT1Q9HBX3 110 aa11.32□□□□□ -0.6
SDC2-205ENST00000520233 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
SDC2-205ENST00000520233 HECTD4Q9Y4D8 3996 aa11.32□□□□□ -0.6
SDC2-205ENST00000520233 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
SDC2-205ENST00000520233 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
SDC2-205ENST00000520233 DPH3Q96FX2 82 aa11.31□□□□□ -0.6
SDC2-205ENST00000520233 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
SDC2-205ENST00000520233 DAND5Q8N907 189 aa11.29□□□□□ -0.6
SDC2-205ENST00000520233 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
SDC2-205ENST00000520233 A0A087WYN8 130 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 PLA2G2DQ9UNK4 145 aa11.27□□□□□ -0.61
SDC2-205ENST00000520233 DNAH5Q8TE73 4624 aa11.26□□□□□ -0.61
SDC2-205ENST00000520233 A0A1W2PNN7 141 aa11.26□□□□□ -0.61
SDC2-205ENST00000520233 Q6ZVH6 145 aa11.26□□□□□ -0.61
SDC2-205ENST00000520233 C12orf57Q99622 126 aa11.26□□□□□ -0.61
SDC2-205ENST00000520233 SPANXB1Q9NS25 103 aaPredicted RBP11.26□□□□□ -0.61
SDC2-205ENST00000520233 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
SDC2-205ENST00000520233 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms