RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 BOD1L2Q8IYS8 172 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 EXOC3-AS1Q8N2X6 119 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 ZFAND2AQ8N6M9 145 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 GATD1Q8NB37 220 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 CMTM2Q8TAZ6 248 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 SFRP2Q96HF1 295 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 OTORQ9NRC9 128 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 PRO0255Q9UI72 69 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 LY96Q9Y6Y9 160 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 IGKV2-40A0A087WW87 121 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-202ENST00000517391 TRGV1A0A0A0MS02 117 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 J3QR89 54 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 PDE6DO43924 150 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 SPINK4O60575 86 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 IGKV2D-40P01614 121 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-202ENST00000517391 MT-ND6P03923 174 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 TDRG1Q3Y452 100 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 Q6AWC8 147 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 SMIM7Q9BQ49 75 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 SMIM3Q9BZL3 60 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 CST9LQ9H4G1 147 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 LINC00588Q9Y4M8 146 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 ICOSQ9Y6W8 199 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
CPNE3-202ENST00000517391 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 TRAV21A0A0B4J279 112 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 A0A0J9YY99 117 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 ORM1P02763 201 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 ADIRFQ15847 76 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 MRPL54Q6P161 138 aaKnown RBP2.92□□□□□ -1.94
CPNE3-202ENST00000517391 TMEM136Q6ZRR5 245 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 C5orf17Q8NAS9 161 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 Q8TAT8 98 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 SPANXDQ9BXN6 97 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 TMEM167BQ9NRX6 74 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 GNG13Q9P2W3 67 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 HHLA3Q9XRX5 114 aa2.92□□□□□ -1.94
CPNE3-202ENST00000517391 A0A096LPF7 62 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 TRGV4A0A0C4DH28 118 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 CTXND1A0A1B0GTU2 59 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 C9JCJ5 164 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 M0R2P5 195 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 ARL14EPLP0DKL9 152 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 PRB4P10163 310 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-202ENST00000517391 SRIP30626 198 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 CRYBA4P53673 196 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 ESRGQ1W209 222 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 SPATA45Q537H7 98 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 RASL11AQ6T310 242 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 GOLT1AQ6ZVE7 132 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 C10orf126Q8N4M7 172 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 C1orf64Q8NEQ6 169 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 ST20Q9HBF5 79 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 MRPL16Q9NX20 251 aaKnown RBP2.91□□□□□ -1.94
CPNE3-202ENST00000517391 ARL2-SNX15V9GYD0 113 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 HECTD4Q9Y4D8 3996 aa2.91□□□□□ -1.94
CPNE3-202ENST00000517391 A0A1W2PRE2 83 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 TCRAP04437 139 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 EVI2AP22794 236 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 GCHFRP30047 84 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 SEC11AP67812 179 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 TMEM75Q8N9X5 138 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 PTH2Q96A98 100 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 SIGMAR1Q99720 223 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 PMCHL2Q9BQD1 86 aa2.9□□□□□ -1.95
CPNE3-202ENST00000517391 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 A0A1B0GV50 99 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 TRBV6-4A0A1B0GX49 114 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 C8orf87E5RJ46 101 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 H3BQ85 93 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 NUPR1O60356 82 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 IGHV3-53P01767 116 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
CPNE3-202ENST00000517391 BATFQ16520 125 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 BAGE3Q86Y29 109 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 BAGE2Q86Y30 109 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 FER1L6-AS1Q8NA97 138 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 PRADC1Q9BSG0 188 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 IL36BQ9NZH7 164 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 EPDR1Q9UM22 224 aa2.89□□□□□ -1.95
CPNE3-202ENST00000517391 TRAV8-1A0A0A6YYK1 113 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 FABP5P3A8MUU1 101 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 A8MWV9 139 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 GGTLC3B5MD39 225 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 INAFM2P0DMQ5 153 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 RHOHQ15669 191 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 Q6ZQT7 251 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-202ENST00000517391 SPATA12Q7Z6I5 190 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 OR5A1Q8NGJ0 315 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 BORCS7Q96B45 105 aa2.88□□□□□ -1.95
CPNE3-202ENST00000517391 TRBV6-1A0A0K0K1D8 114 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms