RNA–Protein interactions for RNA: ENST00000509677.5

SH3BP2-214, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-214ENST00000509677 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
SH3BP2-214ENST00000509677 C6orf226Q5I0X4 101 aa11.59□□□□□ -0.55
SH3BP2-214ENST00000509677 A0A087WYN8 130 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
SH3BP2-214ENST00000509677 H3BRM9 83 aa11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 LEPROTL1O95214 131 aa11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 CKS1BP61024 79 aa11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 Q8IZM0 81 aa11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 C6orf48Q9UBA6 75 aa11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
SH3BP2-214ENST00000509677 RPL18AQ02543 176 aaKnown RBP11.56□□□□□ -0.56
SH3BP2-214ENST00000509677 LINC00474Q9P2X8 69 aa11.56□□□□□ -0.56
SH3BP2-214ENST00000509677 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
SH3BP2-214ENST00000509677 FABP4P15090 132 aa11.55□□□□□ -0.56
SH3BP2-214ENST00000509677 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
SH3BP2-214ENST00000509677 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
SH3BP2-214ENST00000509677 STPG4Q8N801 248 aa11.55□□□□□ -0.56
SH3BP2-214ENST00000509677 TRAV12-1A0A0B4J245 112 aa11.54□□□□□ -0.56
SH3BP2-214ENST00000509677 H0Y8G0 127 aa11.54□□□□□ -0.56
SH3BP2-214ENST00000509677 PLAC8Q9NZF1 115 aa11.54□□□□□ -0.56
SH3BP2-214ENST00000509677 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
SH3BP2-214ENST00000509677 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
SH3BP2-214ENST00000509677 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
SH3BP2-214ENST00000509677 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
SH3BP2-214ENST00000509677 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
SH3BP2-214ENST00000509677 F8VRH5 84 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 CXCL5P42830 114 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 Q6ZRP5 223 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
SH3BP2-214ENST00000509677 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
SH3BP2-214ENST00000509677 PLA2G1BP04054 148 aaKnown RBP11.49□□□□□ -0.57
SH3BP2-214ENST00000509677 ODF1Q14990 250 aa11.48□□□□□ -0.57
SH3BP2-214ENST00000509677 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
SH3BP2-214ENST00000509677 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
SH3BP2-214ENST00000509677 J3QL48 77 aa11.46□□□□□ -0.57
SH3BP2-214ENST00000509677 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
SH3BP2-214ENST00000509677 RPL37AP61513 92 aaKnown RBP11.45□□□□□ -0.58
SH3BP2-214ENST00000509677 TMEM223A0PJW6 202 aa11.44□□□□□ -0.58
SH3BP2-214ENST00000509677 COA6Q5JTJ3 125 aaKnown RBP11.44□□□□□ -0.58
SH3BP2-214ENST00000509677 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
SH3BP2-214ENST00000509677 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
SH3BP2-214ENST00000509677 FAM168BA1KXE4 195 aa11.42□□□□□ -0.58
SH3BP2-214ENST00000509677 DPM2O94777 84 aa11.41□□□□□ -0.58
SH3BP2-214ENST00000509677 PLNP26678 52 aa11.41□□□□□ -0.58
SH3BP2-214ENST00000509677 KRTAP10-4P60372 401 aaPredicted RBP11.41□□□□□ -0.58
SH3BP2-214ENST00000509677 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
SH3BP2-214ENST00000509677 FAM19A5Q7Z5A7 132 aaPredicted RBP11.4□□□□□ -0.58
SH3BP2-214ENST00000509677 XAGE1AQ9HD64 81 aa11.4□□□□□ -0.58
SH3BP2-214ENST00000509677 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
SH3BP2-214ENST00000509677 IGKCP01834 107 aa11.38□□□□□ -0.59
SH3BP2-214ENST00000509677 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
SH3BP2-214ENST00000509677 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
SH3BP2-214ENST00000509677 PKHD1L1Q86WI1 4243 aa11.38□□□□□ -0.59
SH3BP2-214ENST00000509677 PFN2P35080 140 aa11.37□□□□□ -0.59
SH3BP2-214ENST00000509677 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
SH3BP2-214ENST00000509677 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
SH3BP2-214ENST00000509677 ERG28Q9UKR5 140 aa11.35□□□□□ -0.59
SH3BP2-214ENST00000509677 C3orf79P0CE67 100 aa11.34□□□□□ -0.59
SH3BP2-214ENST00000509677 KRTDAPP60985 99 aa11.34□□□□□ -0.59
SH3BP2-214ENST00000509677 HERVK_113P61574 105 aa11.34□□□□□ -0.59
SH3BP2-214ENST00000509677 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
SH3BP2-214ENST00000509677 M0QXV9 152 aa11.33□□□□□ -0.6
SH3BP2-214ENST00000509677 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
SH3BP2-214ENST00000509677 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
SH3BP2-214ENST00000509677 LEPROTO15243 131 aa11.32□□□□□ -0.6
SH3BP2-214ENST00000509677 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
SH3BP2-214ENST00000509677 LINC01545Q5VT33 79 aa11.32□□□□□ -0.6
SH3BP2-214ENST00000509677 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
SH3BP2-214ENST00000509677 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
SH3BP2-214ENST00000509677 COX17Q14061 63 aa11.31□□□□□ -0.6
SH3BP2-214ENST00000509677 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
SH3BP2-214ENST00000509677 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
SH3BP2-214ENST00000509677 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
SH3BP2-214ENST00000509677 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
SH3BP2-214ENST00000509677 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 J3QQQ9 107 aa11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 S100A6P06703 90 aa11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 LINC00158P58513 81 aa11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 C22orf24Q9Y442 160 aa11.29□□□□□ -0.6
SH3BP2-214ENST00000509677 MYMXA0A1B0GTQ4 84 aa11.28□□□□□ -0.6
SH3BP2-214ENST00000509677 HERV-K104P63124 156 aa11.28□□□□□ -0.6
SH3BP2-214ENST00000509677 UBE2BP63146 152 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms