RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
HMGCL-208ENST00000509389 TSTD3H0UI37 97 aa9.54□□□□□ -0.88
HMGCL-208ENST00000509389 HERVK_113P61574 105 aa9.54□□□□□ -0.88
HMGCL-208ENST00000509389 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
HMGCL-208ENST00000509389 IGKV2D-24A0A075B6R9 120 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 A0A087WZ39 114 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 J3QL48 77 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 SS18Q15532 418 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 MIAQ16674 131 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 KRTAP26-1Q6PEX3 210 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 PRO1933Q9H354 126 aa9.53□□□□□ -0.88
HMGCL-208ENST00000509389 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 H3BRM9 83 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 UBE2WQ96B02 151 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.88
HMGCL-208ENST00000509389 LEPROTO15243 131 aa9.51□□□□□ -0.89
HMGCL-208ENST00000509389 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
HMGCL-208ENST00000509389 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-208ENST00000509389 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
HMGCL-208ENST00000509389 FOXI1Q12951 378 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 NMUP48645 174 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 SLC25A34Q6PIV7 304 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
HMGCL-208ENST00000509389 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
HMGCL-208ENST00000509389 J3QQQ9 107 aa9.49□□□□□ -0.89
HMGCL-208ENST00000509389 CRPP02741 224 aa9.49□□□□□ -0.89
HMGCL-208ENST00000509389 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
HMGCL-208ENST00000509389 DDTP30046 118 aa9.48□□□□□ -0.89
HMGCL-208ENST00000509389 XCL1P47992 114 aa9.48□□□□□ -0.89
HMGCL-208ENST00000509389 C2orf91Q6ZV80 131 aa9.48□□□□□ -0.89
HMGCL-208ENST00000509389 TTTY13Q9BZ97 58 aa9.48□□□□□ -0.89
HMGCL-208ENST00000509389 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
HMGCL-208ENST00000509389 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
HMGCL-208ENST00000509389 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
HMGCL-208ENST00000509389 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
HMGCL-208ENST00000509389 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
HMGCL-208ENST00000509389 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
HMGCL-208ENST00000509389 COX7A2LO14548 114 aa9.45□□□□□ -0.9
HMGCL-208ENST00000509389 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
HMGCL-208ENST00000509389 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
HMGCL-208ENST00000509389 NDUFA1O15239 70 aa9.44□□□□□ -0.9
HMGCL-208ENST00000509389 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
HMGCL-208ENST00000509389 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
HMGCL-208ENST00000509389 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
HMGCL-208ENST00000509389 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
HMGCL-208ENST00000509389 GAGE12HA6NDE8 117 aa9.43□□□□□ -0.9
HMGCL-208ENST00000509389 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
HMGCL-208ENST00000509389 KIAA0087Q14695 138 aa9.43□□□□□ -0.9
HMGCL-208ENST00000509389 Q8IZM0 81 aa9.43□□□□□ -0.9
HMGCL-208ENST00000509389 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
HMGCL-208ENST00000509389 USP17L23D6RBM5 183 aa9.41□□□□□ -0.9
HMGCL-208ENST00000509389 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
HMGCL-208ENST00000509389 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
HMGCL-208ENST00000509389 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
HMGCL-208ENST00000509389 LINC00587B1AMM8 73 aa9.4□□□□□ -0.9
HMGCL-208ENST00000509389 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
HMGCL-208ENST00000509389 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
HMGCL-208ENST00000509389 PCP4L1A6NKN8 68 aa9.39□□□□□ -0.91
HMGCL-208ENST00000509389 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
HMGCL-208ENST00000509389 LITAFQ99732 161 aa9.39□□□□□ -0.91
HMGCL-208ENST00000509389 APOMO95445 188 aa9.38□□□□□ -0.91
HMGCL-208ENST00000509389 ORAOV1Q8WV07 137 aa9.38□□□□□ -0.91
HMGCL-208ENST00000509389 SPANXB1Q9NS25 103 aaPredicted RBP9.38□□□□□ -0.91
HMGCL-208ENST00000509389 TIMM17BO60830 172 aa9.37□□□□□ -0.91
HMGCL-208ENST00000509389 OXTP01178 125 aa9.37□□□□□ -0.91
HMGCL-208ENST00000509389 CXCL5P42830 114 aa9.37□□□□□ -0.91
HMGCL-208ENST00000509389 HERV-K104P63124 156 aa9.37□□□□□ -0.91
HMGCL-208ENST00000509389 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
HMGCL-208ENST00000509389 TAL2Q16559 108 aa9.37□□□□□ -0.91
HMGCL-208ENST00000509389 MALP21145 153 aa9.36□□□□□ -0.91
HMGCL-208ENST00000509389 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
HMGCL-208ENST00000509389 CTAG1AP78358 180 aa9.36□□□□□ -0.91
HMGCL-208ENST00000509389 HSD52Q0P140 79 aa9.36□□□□□ -0.91
HMGCL-208ENST00000509389 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
HMGCL-208ENST00000509389 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
HMGCL-208ENST00000509389 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
HMGCL-208ENST00000509389 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
HMGCL-208ENST00000509389 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
HMGCL-208ENST00000509389 HMCN2Q8NDA2 5059 aa9.34□□□□□ -0.91
HMGCL-208ENST00000509389 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
HMGCL-208ENST00000509389 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
HMGCL-208ENST00000509389 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
HMGCL-208ENST00000509389 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
HMGCL-208ENST00000509389 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
HMGCL-208ENST00000509389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.34□□□□□ -0.91
HMGCL-208ENST00000509389 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
HMGCL-208ENST00000509389 F8WDY8 70 aa9.33□□□□□ -0.92
HMGCL-208ENST00000509389 PANO1I0J062 215 aa9.33□□□□□ -0.92
HMGCL-208ENST00000509389 PRSS2P07478 247 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms