RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 C6orf226Q5I0X4 101 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
HOXC6-204ENST00000509328 C2orf82Q6UX34 121 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BMQ99879 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 C6orf48Q9UBA6 75 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 TRAV12-1A0A0B4J245 112 aa12.81□□□□□ -0.36
HOXC6-204ENST00000509328 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
HOXC6-204ENST00000509328 NUPR1O60356 82 aa12.81□□□□□ -0.36
HOXC6-204ENST00000509328 CKS1BP61024 79 aa12.81□□□□□ -0.36
HOXC6-204ENST00000509328 CHTOPQ9Y3Y2 248 aaKnown RBP12.81□□□□□ -0.36
HOXC6-204ENST00000509328 LEPROTL1O95214 131 aa12.8□□□□□ -0.36
HOXC6-204ENST00000509328 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
HOXC6-204ENST00000509328 GAGE2BQ13066 116 aa12.8□□□□□ -0.36
HOXC6-204ENST00000509328 PLAC8Q9NZF1 115 aa12.8□□□□□ -0.36
HOXC6-204ENST00000509328 VPS13BQ7Z7G8 4022 aa12.79□□□□□ -0.36
HOXC6-204ENST00000509328 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
HOXC6-204ENST00000509328 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
HOXC6-204ENST00000509328 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
HOXC6-204ENST00000509328 FAT1Q14517 4588 aa12.79□□□□□ -0.36
HOXC6-204ENST00000509328 C11orf86A6NJI1 115 aa12.78□□□□□ -0.36
HOXC6-204ENST00000509328 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
HOXC6-204ENST00000509328 STPG4Q8N801 248 aa12.78□□□□□ -0.36
HOXC6-204ENST00000509328 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
HOXC6-204ENST00000509328 ABCA13Q86UQ4 5058 aa12.78□□□□□ -0.36
HOXC6-204ENST00000509328 PCLOQ9Y6V0 5065 aa12.77□□□□□ -0.37
HOXC6-204ENST00000509328 PLA2G1BP04054 148 aaKnown RBP12.77□□□□□ -0.37
HOXC6-204ENST00000509328 CXCL5P42830 114 aa12.77□□□□□ -0.37
HOXC6-204ENST00000509328 HSPB8Q9UJY1 196 aa12.77□□□□□ -0.37
HOXC6-204ENST00000509328 F8VRH5 84 aa12.75□□□□□ -0.37
HOXC6-204ENST00000509328 FABP4P15090 132 aa12.74□□□□□ -0.37
HOXC6-204ENST00000509328 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
HOXC6-204ENST00000509328 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
HOXC6-204ENST00000509328 Q6ZRP5 223 aa12.73□□□□□ -0.37
HOXC6-204ENST00000509328 NDUFC2-KCTD14E9PQ53 114 aa12.72□□□□□ -0.37
HOXC6-204ENST00000509328 H0Y8G0 127 aa12.72□□□□□ -0.37
HOXC6-204ENST00000509328 C9orf116Q5BN46 136 aaPredicted RBP12.72□□□□□ -0.37
HOXC6-204ENST00000509328 ODF1Q14990 250 aa12.71□□□□□ -0.37
HOXC6-204ENST00000509328 SRRM2Q9UQ35 2752 aaKnown RBP12.7□□□□□ -0.38
HOXC6-204ENST00000509328 RPL37AP61513 92 aaKnown RBP12.69□□□□□ -0.38
HOXC6-204ENST00000509328 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
HOXC6-204ENST00000509328 COA6Q5JTJ3 125 aaKnown RBP12.69□□□□□ -0.38
HOXC6-204ENST00000509328 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
HOXC6-204ENST00000509328 TMEM223A0PJW6 202 aa12.68□□□□□ -0.38
HOXC6-204ENST00000509328 INAFM2P0DMQ5 153 aa12.68□□□□□ -0.38
HOXC6-204ENST00000509328 C7orf33Q8WU49 177 aa12.68□□□□□ -0.38
HOXC6-204ENST00000509328 MAP1LC3CQ9BXW4 147 aa12.68□□□□□ -0.38
HOXC6-204ENST00000509328 A0A1W2PNN7 141 aa12.67□□□□□ -0.38
HOXC6-204ENST00000509328 KRTAP10-4P60372 401 aaPredicted RBP12.67□□□□□ -0.38
HOXC6-204ENST00000509328 PLNP26678 52 aa12.65□□□□□ -0.38
HOXC6-204ENST00000509328 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
HOXC6-204ENST00000509328 C9orf129Q5T035 196 aaKnown RBP12.63□□□□□ -0.39
HOXC6-204ENST00000509328 FAM168BA1KXE4 195 aa12.62□□□□□ -0.39
HOXC6-204ENST00000509328 DPM2O94777 84 aa12.62□□□□□ -0.39
HOXC6-204ENST00000509328 PMCHL2Q9BQD1 86 aa12.61□□□□□ -0.39
HOXC6-204ENST00000509328 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
HOXC6-204ENST00000509328 IGKCP01834 107 aa12.6□□□□□ -0.39
HOXC6-204ENST00000509328 FAM19A5Q7Z5A7 132 aaPredicted RBP12.6□□□□□ -0.39
HOXC6-204ENST00000509328 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
HOXC6-204ENST00000509328 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
HOXC6-204ENST00000509328 COX17Q14061 63 aa12.57□□□□□ -0.4
HOXC6-204ENST00000509328 PHF5AQ7RTV0 110 aaKnown RBP12.57□□□□□ -0.4
HOXC6-204ENST00000509328 KRTAP7-1Q8IUC3 87 aa12.57□□□□□ -0.4
HOXC6-204ENST00000509328 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
HOXC6-204ENST00000509328 PFN2P35080 140 aa12.56□□□□□ -0.4
HOXC6-204ENST00000509328 HERVK_113P61574 105 aa12.56□□□□□ -0.4
HOXC6-204ENST00000509328 PRR3P79522 188 aaKnown RBP12.56□□□□□ -0.4
HOXC6-204ENST00000509328 PET117Q6UWS5 81 aa12.56□□□□□ -0.4
HOXC6-204ENST00000509328 M0QXV9 152 aa12.54□□□□□ -0.4
HOXC6-204ENST00000509328 LEPROTO15243 131 aa12.54□□□□□ -0.4
HOXC6-204ENST00000509328 C3orf79P0CE67 100 aa12.54□□□□□ -0.4
HOXC6-204ENST00000509328 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
HOXC6-204ENST00000509328 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
HOXC6-204ENST00000509328 PKHD1L1Q86WI1 4243 aa12.53□□□□□ -0.4
HOXC6-204ENST00000509328 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
HOXC6-204ENST00000509328 FLG2Q5D862 2391 aaPredicted RBP12.52□□□□□ -0.4
HOXC6-204ENST00000509328 NDUFA12Q9UI09 145 aa12.52□□□□□ -0.41
HOXC6-204ENST00000509328 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
HOXC6-204ENST00000509328 KRTDAPP60985 99 aa12.51□□□□□ -0.41
HOXC6-204ENST00000509328 HERV-K104P63124 156 aa12.51□□□□□ -0.41
HOXC6-204ENST00000509328 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
HOXC6-204ENST00000509328 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
HOXC6-204ENST00000509328 J3QQQ9 107 aa12.5□□□□□ -0.41
HOXC6-204ENST00000509328 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
HOXC6-204ENST00000509328 LINC00158P58513 81 aa12.49□□□□□ -0.41
HOXC6-204ENST00000509328 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
HOXC6-204ENST00000509328 PSORS1C2Q9UIG4 136 aa12.49□□□□□ -0.41
HOXC6-204ENST00000509328 C22orf24Q9Y442 160 aa12.49□□□□□ -0.41
HOXC6-204ENST00000509328 S100A6P06703 90 aa12.48□□□□□ -0.41
HOXC6-204ENST00000509328 UBE2BP63146 152 aa12.48□□□□□ -0.41
HOXC6-204ENST00000509328 TP73-AS1Q9UF72 201 aa12.48□□□□□ -0.41
HOXC6-204ENST00000509328 LINC00587B1AMM8 73 aa12.47□□□□□ -0.41
HOXC6-204ENST00000509328 E9PLD3 99 aa12.47□□□□□ -0.41
HOXC6-204ENST00000509328 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
HOXC6-204ENST00000509328 NMUP48645 174 aa12.47□□□□□ -0.41
HOXC6-204ENST00000509328 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms