RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
PTPN13-206ENST00000507902 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
PTPN13-206ENST00000507902 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
PTPN13-206ENST00000507902 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
PTPN13-206ENST00000507902 KIAA0087Q14695 138 aa8.79□□□□□ -1
PTPN13-206ENST00000507902 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
PTPN13-206ENST00000507902 COLCA2A8K830 154 aa8.77□□□□□ -1.01
PTPN13-206ENST00000507902 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
PTPN13-206ENST00000507902 IGLC3P0DOY3 106 aa8.77□□□□□ -1.01
PTPN13-206ENST00000507902 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
PTPN13-206ENST00000507902 F8VRH5 84 aa8.76□□□□□ -1.01
PTPN13-206ENST00000507902 LCE2BO14633 110 aa8.76□□□□□ -1.01
PTPN13-206ENST00000507902 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
PTPN13-206ENST00000507902 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
PTPN13-206ENST00000507902 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
PTPN13-206ENST00000507902 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
PTPN13-206ENST00000507902 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
PTPN13-206ENST00000507902 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
PTPN13-206ENST00000507902 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
PTPN13-206ENST00000507902 SERF1AO75920 110 aa8.73□□□□□ -1.01
PTPN13-206ENST00000507902 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
PTPN13-206ENST00000507902 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
PTPN13-206ENST00000507902 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
PTPN13-206ENST00000507902 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
PTPN13-206ENST00000507902 GAGE2EQ4V326 116 aa8.72□□□□□ -1.01
PTPN13-206ENST00000507902 Q6ZRP5 223 aa8.72□□□□□ -1.01
PTPN13-206ENST00000507902 GAGE2DQ9UEU5 116 aa8.72□□□□□ -1.01
PTPN13-206ENST00000507902 HSPB8Q9UJY1 196 aa8.72□□□□□ -1.01
PTPN13-206ENST00000507902 ZNF22P17026 224 aaPredicted RBP8.71□□□□□ -1.02
PTPN13-206ENST00000507902 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
PTPN13-206ENST00000507902 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
PTPN13-206ENST00000507902 FAM19A2Q8N3H0 131 aa8.71□□□□□ -1.02
PTPN13-206ENST00000507902 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
PTPN13-206ENST00000507902 SCO1O75880 301 aa8.7□□□□□ -1.02
PTPN13-206ENST00000507902 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
PTPN13-206ENST00000507902 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
PTPN13-206ENST00000507902 PRR3P79522 188 aaKnown RBP8.68□□□□□ -1.02
PTPN13-206ENST00000507902 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
PTPN13-206ENST00000507902 S100A1P23297 94 aa8.67□□□□□ -1.02
PTPN13-206ENST00000507902 PLNP26678 52 aa8.66□□□□□ -1.02
PTPN13-206ENST00000507902 LINC00310P59036 64 aa8.66□□□□□ -1.02
PTPN13-206ENST00000507902 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
PTPN13-206ENST00000507902 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
PTPN13-206ENST00000507902 H0Y8G0 127 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
PTPN13-206ENST00000507902 M0QXV9 152 aa8.64□□□□□ -1.03
PTPN13-206ENST00000507902 FABP4P15090 132 aa8.64□□□□□ -1.03
PTPN13-206ENST00000507902 COX17Q14061 63 aa8.64□□□□□ -1.03
PTPN13-206ENST00000507902 ODF1Q14990 250 aa8.64□□□□□ -1.03
PTPN13-206ENST00000507902 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
PTPN13-206ENST00000507902 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
PTPN13-206ENST00000507902 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
PTPN13-206ENST00000507902 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
PTPN13-206ENST00000507902 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
PTPN13-206ENST00000507902 OXTP01178 125 aa8.63□□□□□ -1.03
PTPN13-206ENST00000507902 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
PTPN13-206ENST00000507902 J3QL48 77 aa8.62□□□□□ -1.03
PTPN13-206ENST00000507902 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
PTPN13-206ENST00000507902 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
PTPN13-206ENST00000507902 NUPR1O60356 82 aa8.61□□□□□ -1.03
PTPN13-206ENST00000507902 DPM2O94777 84 aa8.61□□□□□ -1.03
PTPN13-206ENST00000507902 HERVK_113P61574 105 aa8.61□□□□□ -1.03
PTPN13-206ENST00000507902 UBE2BP63146 152 aa8.61□□□□□ -1.03
PTPN13-206ENST00000507902 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
PTPN13-206ENST00000507902 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
PTPN13-206ENST00000507902 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
PTPN13-206ENST00000507902 PFN2P35080 140 aa8.6□□□□□ -1.03
PTPN13-206ENST00000507902 TP73-AS1Q9UF72 201 aa8.6□□□□□ -1.03
PTPN13-206ENST00000507902 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
PTPN13-206ENST00000507902 IGKCP01834 107 aa8.59□□□□□ -1.03
PTPN13-206ENST00000507902 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
PTPN13-206ENST00000507902 HERV-K104P63124 156 aa8.59□□□□□ -1.03
PTPN13-206ENST00000507902 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
PTPN13-206ENST00000507902 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
PTPN13-206ENST00000507902 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
PTPN13-206ENST00000507902 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
PTPN13-206ENST00000507902 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
PTPN13-206ENST00000507902 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
PTPN13-206ENST00000507902 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
PTPN13-206ENST00000507902 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
PTPN13-206ENST00000507902 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
PTPN13-206ENST00000507902 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
PTPN13-206ENST00000507902 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
PTPN13-206ENST00000507902 C22orf24Q9Y442 160 aa8.57□□□□□ -1.04
PTPN13-206ENST00000507902 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
PTPN13-206ENST00000507902 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
PTPN13-206ENST00000507902 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
PTPN13-206ENST00000507902 LEPROTO15243 131 aa8.55□□□□□ -1.04
PTPN13-206ENST00000507902 LINC00158P58513 81 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms