RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 PRSS2P07478 247 aa11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 FABP4P15090 132 aa11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 HSPB8Q9UJY1 196 aa11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
CCHCR1-221ENST00000507226 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
CCHCR1-221ENST00000507226 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
CCHCR1-221ENST00000507226 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
CCHCR1-221ENST00000507226 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
CCHCR1-221ENST00000507226 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-221ENST00000507226 F8VRH5 84 aa11.33□□□□□ -0.6
CCHCR1-221ENST00000507226 H0Y8G0 127 aa11.33□□□□□ -0.6
CCHCR1-221ENST00000507226 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
CCHCR1-221ENST00000507226 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
CCHCR1-221ENST00000507226 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
CCHCR1-221ENST00000507226 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 CKS1BP61024 79 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 ODF1Q14990 250 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
CCHCR1-221ENST00000507226 A0A087WYN8 130 aa11.31□□□□□ -0.6
CCHCR1-221ENST00000507226 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
CCHCR1-221ENST00000507226 CXCL5P42830 114 aa11.3□□□□□ -0.6
CCHCR1-221ENST00000507226 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-221ENST00000507226 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
CCHCR1-221ENST00000507226 TLX1NBP0CAT3 122 aa11.29□□□□□ -0.6
CCHCR1-221ENST00000507226 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
CCHCR1-221ENST00000507226 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
CCHCR1-221ENST00000507226 Q5VSD8 79 aa11.28□□□□□ -0.6
CCHCR1-221ENST00000507226 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
CCHCR1-221ENST00000507226 STPG4Q8N801 248 aa11.28□□□□□ -0.6
CCHCR1-221ENST00000507226 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CCHCR1-221ENST00000507226 TMEM223A0PJW6 202 aa11.27□□□□□ -0.61
CCHCR1-221ENST00000507226 EPM2AB3EWF7 344 aa11.27□□□□□ -0.61
CCHCR1-221ENST00000507226 Q6ZRP5 223 aa11.27□□□□□ -0.61
CCHCR1-221ENST00000507226 FAM229AH3BQW9 127 aa11.26□□□□□ -0.61
CCHCR1-221ENST00000507226 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
CCHCR1-221ENST00000507226 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
CCHCR1-221ENST00000507226 PLNP26678 52 aa11.24□□□□□ -0.61
CCHCR1-221ENST00000507226 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CCHCR1-221ENST00000507226 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CCHCR1-221ENST00000507226 FAT1Q14517 4588 aa11.23□□□□□ -0.61
CCHCR1-221ENST00000507226 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
CCHCR1-221ENST00000507226 DPM2O94777 84 aa11.23□□□□□ -0.61
CCHCR1-221ENST00000507226 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
CCHCR1-221ENST00000507226 IGKCP01834 107 aa11.21□□□□□ -0.61
CCHCR1-221ENST00000507226 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
CCHCR1-221ENST00000507226 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
CCHCR1-221ENST00000507226 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-221ENST00000507226 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-221ENST00000507226 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
CCHCR1-221ENST00000507226 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-221ENST00000507226 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
CCHCR1-221ENST00000507226 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-221ENST00000507226 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-221ENST00000507226 SFTA2Q6UW10 78 aa11.17□□□□□ -0.62
CCHCR1-221ENST00000507226 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
CCHCR1-221ENST00000507226 KRTDAPP60985 99 aa11.16□□□□□ -0.62
CCHCR1-221ENST00000507226 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
CCHCR1-221ENST00000507226 C7orf33Q8WU49 177 aa11.16□□□□□ -0.62
CCHCR1-221ENST00000507226 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
CCHCR1-221ENST00000507226 LEPROTO15243 131 aa11.15□□□□□ -0.62
CCHCR1-221ENST00000507226 HERVK_113P61574 105 aa11.15□□□□□ -0.62
CCHCR1-221ENST00000507226 S100A6P06703 90 aa11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 PFN2P35080 140 aa11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 TSPEAR-AS2P59090 65 aa11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
CCHCR1-221ENST00000507226 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
CCHCR1-221ENST00000507226 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
CCHCR1-221ENST00000507226 S100A2P29034 98 aa11.12□□□□□ -0.63
CCHCR1-221ENST00000507226 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-221ENST00000507226 J3QQQ9 107 aa11.11□□□□□ -0.63
CCHCR1-221ENST00000507226 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
CCHCR1-221ENST00000507226 COX17Q14061 63 aa11.11□□□□□ -0.63
CCHCR1-221ENST00000507226 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
CCHCR1-221ENST00000507226 ABCA13Q86UQ4 5058 aa11.1□□□□□ -0.63
CCHCR1-221ENST00000507226 VPS13BQ7Z7G8 4022 aa11.1□□□□□ -0.63
CCHCR1-221ENST00000507226 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-221ENST00000507226 HERV-K104P63124 156 aa11.1□□□□□ -0.63
CCHCR1-221ENST00000507226 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
CCHCR1-221ENST00000507226 C20orf202A1L168 122 aa11.09□□□□□ -0.63
CCHCR1-221ENST00000507226 E9PLD3 99 aa11.09□□□□□ -0.63
CCHCR1-221ENST00000507226 M0QXV9 152 aa11.09□□□□□ -0.63
CCHCR1-221ENST00000507226 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-221ENST00000507226 LINC00158P58513 81 aa11.08□□□□□ -0.64
CCHCR1-221ENST00000507226 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
CCHCR1-221ENST00000507226 C5orf52A6NGY3 159 aa11.07□□□□□ -0.64
CCHCR1-221ENST00000507226 NMUP48645 174 aa11.07□□□□□ -0.64
CCHCR1-221ENST00000507226 PRR3P79522 188 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-221ENST00000507226 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
CCHCR1-221ENST00000507226 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
CCHCR1-221ENST00000507226 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
CCHCR1-221ENST00000507226 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
CCHCR1-221ENST00000507226 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
CCHCR1-221ENST00000507226 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms