RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 HIST3H2BBQ8N257 126 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
SNCA-210ENST00000506691 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
SNCA-210ENST00000506691 C20orf202A1L168 122 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 C5orf52A6NGY3 159 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 DPM2O94777 84 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 ZNF22P17026 224 aaPredicted RBP7.04□□□□□ -1.28
SNCA-210ENST00000506691 SYCNQ0VAF6 134 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 HIGD2BQ4VC39 106 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 TMEM170BQ5T4T1 132 aa7.04□□□□□ -1.28
SNCA-210ENST00000506691 C11orf86A6NJI1 115 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 H0Y8G0 127 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 NDUFA1O15239 70 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 IGKCP01834 107 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 C3orf79P0CE67 100 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 CKS1BP61024 79 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
SNCA-210ENST00000506691 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
SNCA-210ENST00000506691 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 TRBV30A0A0K0K1B3 111 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
SNCA-210ENST00000506691 HERVK_113P61574 105 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 Q6ZSA8 131 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 CARD19Q96LW7 228 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 HIST1H2BLQ99880 126 aa7.02□□□□□ -1.29
SNCA-210ENST00000506691 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 OXTP01178 125 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 SLPIP03973 132 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 KRTDAPP60985 99 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
SNCA-210ENST00000506691 SPINK8P0C7L1 97 aa7□□□□□ -1.29
SNCA-210ENST00000506691 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
SNCA-210ENST00000506691 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
SNCA-210ENST00000506691 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
SNCA-210ENST00000506691 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
SNCA-210ENST00000506691 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
SNCA-210ENST00000506691 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
SNCA-210ENST00000506691 LINC00587B1AMM8 73 aa6.98□□□□□ -1.29
SNCA-210ENST00000506691 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
SNCA-210ENST00000506691 Q6ZRU5 148 aa6.98□□□□□ -1.29
SNCA-210ENST00000506691 LINC00526Q96FQ7 95 aa6.98□□□□□ -1.29
SNCA-210ENST00000506691 LEPROTO15243 131 aa6.97□□□□□ -1.29
SNCA-210ENST00000506691 FUSP35637 526 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNCA-210ENST00000506691 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
SNCA-210ENST00000506691 NMUP48645 174 aa6.96□□□□□ -1.3
SNCA-210ENST00000506691 HERV-K104P63124 156 aa6.96□□□□□ -1.3
SNCA-210ENST00000506691 COX17Q14061 63 aa6.96□□□□□ -1.3
SNCA-210ENST00000506691 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
SNCA-210ENST00000506691 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
SNCA-210ENST00000506691 E9PLD3 99 aa6.95□□□□□ -1.3
SNCA-210ENST00000506691 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
SNCA-210ENST00000506691 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
SNCA-210ENST00000506691 C6orf48Q9UBA6 75 aa6.95□□□□□ -1.3
SNCA-210ENST00000506691 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
SNCA-210ENST00000506691 J3QQQ9 107 aa6.94□□□□□ -1.3
SNCA-210ENST00000506691 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
SNCA-210ENST00000506691 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
SNCA-210ENST00000506691 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
SNCA-210ENST00000506691 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
SNCA-210ENST00000506691 LGALS3P17931 250 aaKnown RBP6.93□□□□□ -1.3
SNCA-210ENST00000506691 ZNF625Q96I27 306 aaPredicted RBP6.93□□□□□ -1.3
SNCA-210ENST00000506691 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
SNCA-210ENST00000506691 HSBP1L1C9JCN9 74 aa6.92□□□□□ -1.3
SNCA-210ENST00000506691 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
SNCA-210ENST00000506691 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
SNCA-210ENST00000506691 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
SNCA-210ENST00000506691 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
SNCA-210ENST00000506691 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
SNCA-210ENST00000506691 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
SNCA-210ENST00000506691 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
SNCA-210ENST00000506691 HAMPP81172 84 aa6.9□□□□□ -1.3
SNCA-210ENST00000506691 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
SNCA-210ENST00000506691 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
SNCA-210ENST00000506691 JOSD1Q15040 202 aaPredicted RBP6.9□□□□□ -1.3
SNCA-210ENST00000506691 STPG4Q8N801 248 aa6.9□□□□□ -1.3
SNCA-210ENST00000506691 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
SNCA-210ENST00000506691 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
SNCA-210ENST00000506691 A0A096LNI7 61 aa6.89□□□□□ -1.31
SNCA-210ENST00000506691 MAJINQ3KP22 176 aa6.89□□□□□ -1.31
SNCA-210ENST00000506691 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
SNCA-210ENST00000506691 Q6ZRP5 223 aa6.89□□□□□ -1.31
SNCA-210ENST00000506691 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
SNCA-210ENST00000506691 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
SNCA-210ENST00000506691 SCXQ7RTU7 201 aa6.88□□□□□ -1.31
SNCA-210ENST00000506691 PLAC8Q9NZF1 115 aa6.88□□□□□ -1.31
SNCA-210ENST00000506691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
SNCA-210ENST00000506691 A0A087WYN8 130 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 LINC00158P58513 81 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
SNCA-210ENST00000506691 TIMM17BO60830 172 aa6.86□□□□□ -1.31
SNCA-210ENST00000506691 PFN2P35080 140 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms