RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 EIF5A2Q9GZV4 153 aaKnown RBP2.47□□□□□ -2.01
HERC4-213ENST00000506515 FABP5P3A8MUU1 101 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 RASL11AQ6T310 242 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 ENHOQ6UWT2 76 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 TOMM5Q8N4H5 51 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 OR2T35Q8NGX2 323 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 SPACA4Q8TDM5 124 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 MGST2Q99735 147 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 OTORQ9NRC9 128 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 IL36BQ9NZH7 164 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 GSKIPQ9P0R6 139 aa2.46□□□□□ -2.02
HERC4-213ENST00000506515 TRBV25-1A0A075B6N4 114 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 IGKV2-40A0A087WW87 121 aaPredicted RBP2.45□□□□□ -2.02
HERC4-213ENST00000506515 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 C19orf71A6NCJ1 209 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 NAP1L6A6NFF2 107 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 IGKV2D-40P01614 121 aaPredicted RBP2.45□□□□□ -2.02
HERC4-213ENST00000506515 TYMSP04818 313 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 CDC34P49427 236 aaPredicted RBP2.45□□□□□ -2.02
HERC4-213ENST00000506515 SULT1A1P50225 295 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 UBE2D1P51668 147 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 H2BFSP57053 126 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 TSPEAR-AS2P59090 65 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 RAB4BP61018 213 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 LSM3P62310 102 aaKnown RBP2.45□□□□□ -2.02
HERC4-213ENST00000506515 KHDC3LQ587J8 217 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 MIC13Q5XKP0 118 aa2.45□□□□□ -2.02
HERC4-213ENST00000506515 NKX6-2Q9C056 277 aaPredicted RBP2.45□□□□□ -2.02
HERC4-213ENST00000506515 LPAP08519 4548 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 TINCRA0A1B0GVN0 87 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 C9orf170A2RU37 121 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 MT-ND6P03923 174 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 LINC00614P0C842 121 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 SMIM17P0DL12 118 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 TPT1P13693 172 aaKnown RBP2.44□□□□□ -2.02
HERC4-213ENST00000506515 ATP6V0CP27449 155 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 HERVK_113P63121 156 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 COX6A2Q02221 97 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 FAM19A5Q7Z5A7 132 aaPredicted RBP2.44□□□□□ -2.02
HERC4-213ENST00000506515 LINC00269Q8N2A0 174 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 GNB1LQ9BYB4 327 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 C11orf1Q9H5F2 150 aa2.44□□□□□ -2.02
HERC4-213ENST00000506515 IGHV1-24A0A0C4DH33 117 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 F6UZH7 168 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 UBE2L6O14933 153 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 LINC00694P0DN24 101 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 PYYP10082 97 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 FGF6P10767 208 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 FGF7P21781 194 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 UBE2D3P61077 147 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 UBE2D2P62837 147 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 UBE2L3P68036 154 aaKnown RBP2.43□□□□□ -2.02
HERC4-213ENST00000506515 PPP1R1AQ13522 171 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 SFRP2Q96HF1 295 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 HYLS1Q96M11 299 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 NPCDR1Q9BY65 106 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
HERC4-213ENST00000506515 UBE2L5PA0A1B0GUS4 154 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 A0A1B0GVG6 124 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 CCL25O15444 150 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 CST7O76096 145 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 S100A5P33763 92 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 NCS1P62166 190 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 EIF5AP63241 154 aaKnown RBP2.42□□□□□ -2.02
HERC4-213ENST00000506515 IQCJQ1A5X6 159 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 FAM74A4Q5TZK3 123 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 GOLT1AQ6ZVE7 132 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 C5orf17Q8NAS9 161 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 FAM167A-AS1Q96KT0 104 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 PACRGQ96M98 296 aaPredicted RBP2.42□□□□□ -2.02
HERC4-213ENST00000506515 AQP10Q96PS8 301 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 DERL1Q9BUN8 251 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 ZFP30Q9Y2G7 519 aa2.42□□□□□ -2.02
HERC4-213ENST00000506515 TRBV6-1A0A0K0K1D8 114 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 SSNA1O43805 119 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 NDUFB6O95139 128 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 ARMS2P0C7Q2 107 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 RNASE3P12724 160 aaKnown RBP2.41□□□□□ -2.02
HERC4-213ENST00000506515 EIF5AL1Q6IS14 154 aaKnown RBP2.41□□□□□ -2.02
HERC4-213ENST00000506515 MIR17HGQ75NE6 70 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 ZNF471Q9BX82 626 aaPredicted RBP2.41□□□□□ -2.02
HERC4-213ENST00000506515 TMEM167BQ9NRX6 74 aa2.41□□□□□ -2.02
HERC4-213ENST00000506515 GVQW2A0A096LPI5 108 aaPredicted RBP2.4□□□□□ -2.03
HERC4-213ENST00000506515 IGHV1-58A0A0C4DH39 117 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 LOC107984640A0A0U1RRK4 108 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 FAM24AA6NFZ4 105 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 TCRAP04437 139 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 C1orf137Q5JT78 98 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 Q8NDZ9 215 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 BTF3L4Q96K17 158 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 IMMP2LQ96T52 175 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 TCEAL7Q9BRU2 100 aa2.4□□□□□ -2.03
HERC4-213ENST00000506515 WDR61Q9GZS3 305 aaKnown RBP2.4□□□□□ -2.03
HERC4-213ENST00000506515 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
HERC4-213ENST00000506515 M0R381 172 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 APOMO95445 188 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 CRYGAP11844 174 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 TMBIM6P55061 237 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms