RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
SMAD1-204ENST00000503324 PKIGQ9Y2B9 76 aa11.26□□□□□ -0.61
SMAD1-204ENST00000503324 A0A087WYN8 130 aa11.25□□□□□ -0.61
SMAD1-204ENST00000503324 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
SMAD1-204ENST00000503324 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
SMAD1-204ENST00000503324 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
SMAD1-204ENST00000503324 ZNF22P17026 224 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-204ENST00000503324 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 PRSS2P07478 247 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 SPINK8P0C7L1 97 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
SMAD1-204ENST00000503324 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
SMAD1-204ENST00000503324 VPS13BQ7Z7G8 4022 aa11.23□□□□□ -0.61
SMAD1-204ENST00000503324 LINC00528Q8N1L1 170 aa11.23□□□□□ -0.61
SMAD1-204ENST00000503324 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
SMAD1-204ENST00000503324 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 H3BRM9 83 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 TLX1NBP0CAT3 122 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 C6orf226Q5I0X4 101 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 DPH3Q96FX2 82 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
SMAD1-204ENST00000503324 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
SMAD1-204ENST00000503324 CKS1BP61024 79 aa11.21□□□□□ -0.61
SMAD1-204ENST00000503324 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
SMAD1-204ENST00000503324 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
SMAD1-204ENST00000503324 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
SMAD1-204ENST00000503324 F8VRH5 84 aa11.2□□□□□ -0.62
SMAD1-204ENST00000503324 FABP4P15090 132 aa11.2□□□□□ -0.62
SMAD1-204ENST00000503324 RPL18AQ02543 176 aaKnown RBP11.2□□□□□ -0.62
SMAD1-204ENST00000503324 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
SMAD1-204ENST00000503324 CXCL5P42830 114 aa11.19□□□□□ -0.62
SMAD1-204ENST00000503324 ODF1Q14990 250 aa11.19□□□□□ -0.62
SMAD1-204ENST00000503324 C9orf116Q5BN46 136 aaPredicted RBP11.19□□□□□ -0.62
SMAD1-204ENST00000503324 Q6ZRP5 223 aa11.19□□□□□ -0.62
SMAD1-204ENST00000503324 STPG4Q8N801 248 aa11.19□□□□□ -0.62
SMAD1-204ENST00000503324 COA6Q5JTJ3 125 aaKnown RBP11.18□□□□□ -0.62
SMAD1-204ENST00000503324 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
SMAD1-204ENST00000503324 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
SMAD1-204ENST00000503324 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
SMAD1-204ENST00000503324 H0Y8G0 127 aa11.16□□□□□ -0.62
SMAD1-204ENST00000503324 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
SMAD1-204ENST00000503324 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
SMAD1-204ENST00000503324 TMEM223A0PJW6 202 aa11.14□□□□□ -0.63
SMAD1-204ENST00000503324 PLA2G1BP04054 148 aaKnown RBP11.14□□□□□ -0.63
SMAD1-204ENST00000503324 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
SMAD1-204ENST00000503324 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
SMAD1-204ENST00000503324 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
SMAD1-204ENST00000503324 RPL37AP61513 92 aaKnown RBP11.11□□□□□ -0.63
SMAD1-204ENST00000503324 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
SMAD1-204ENST00000503324 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
SMAD1-204ENST00000503324 PLNP26678 52 aa11.1□□□□□ -0.63
SMAD1-204ENST00000503324 KRTAP7-1Q8IUC3 87 aa11.1□□□□□ -0.63
SMAD1-204ENST00000503324 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
SMAD1-204ENST00000503324 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
SMAD1-204ENST00000503324 DPM2O94777 84 aa11.09□□□□□ -0.63
SMAD1-204ENST00000503324 INAFM2P0DMQ5 153 aa11.08□□□□□ -0.64
SMAD1-204ENST00000503324 C7orf33Q8WU49 177 aa11.08□□□□□ -0.64
SMAD1-204ENST00000503324 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
SMAD1-204ENST00000503324 IGKCP01834 107 aa11.06□□□□□ -0.64
SMAD1-204ENST00000503324 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
SMAD1-204ENST00000503324 SFTA2Q6UW10 78 aa11.05□□□□□ -0.64
SMAD1-204ENST00000503324 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
SMAD1-204ENST00000503324 C3orf79P0CE67 100 aa11.04□□□□□ -0.64
SMAD1-204ENST00000503324 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
SMAD1-204ENST00000503324 PET117Q6UWS5 81 aa11.04□□□□□ -0.64
SMAD1-204ENST00000503324 PHF5AQ7RTV0 110 aaKnown RBP11.04□□□□□ -0.64
SMAD1-204ENST00000503324 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
SMAD1-204ENST00000503324 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
SMAD1-204ENST00000503324 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
SMAD1-204ENST00000503324 SERTAD4-AS1Q5TG53 156 aa11.03□□□□□ -0.64
SMAD1-204ENST00000503324 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
SMAD1-204ENST00000503324 PFN2P35080 140 aa11.02□□□□□ -0.65
SMAD1-204ENST00000503324 PRR3P79522 188 aaKnown RBP11.02□□□□□ -0.65
SMAD1-204ENST00000503324 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
SMAD1-204ENST00000503324 LEPROTO15243 131 aa11.01□□□□□ -0.65
SMAD1-204ENST00000503324 M0QXV9 152 aa11□□□□□ -0.65
SMAD1-204ENST00000503324 KRTDAPP60985 99 aa11□□□□□ -0.65
SMAD1-204ENST00000503324 HERVK_113P61574 105 aa11□□□□□ -0.65
SMAD1-204ENST00000503324 COX17Q14061 63 aa11□□□□□ -0.65
SMAD1-204ENST00000503324 HIST3H2BBQ8N257 126 aa11□□□□□ -0.65
SMAD1-204ENST00000503324 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-204ENST00000503324 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
SMAD1-204ENST00000503324 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SMAD1-204ENST00000503324 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
SMAD1-204ENST00000503324 J3QQQ9 107 aa10.98□□□□□ -0.65
SMAD1-204ENST00000503324 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
SMAD1-204ENST00000503324 HERV-K104P63124 156 aa10.97□□□□□ -0.65
SMAD1-204ENST00000503324 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
SMAD1-204ENST00000503324 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
SMAD1-204ENST00000503324 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
SMAD1-204ENST00000503324 E9PLD3 99 aa10.96□□□□□ -0.65
SMAD1-204ENST00000503324 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
SMAD1-204ENST00000503324 MYMXA0A1B0GTQ4 84 aa10.95□□□□□ -0.66
SMAD1-204ENST00000503324 FAT3Q8TDW7 4589 aa10.94□□□□□ -0.66
SMAD1-204ENST00000503324 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
SMAD1-204ENST00000503324 S100A6P06703 90 aa10.94□□□□□ -0.66
SMAD1-204ENST00000503324 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms