RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 DPM2O94777 84 aa11.34□□□□□ -0.59
ECHDC2-220ENST00000498544 S100A2P29034 98 aa11.34□□□□□ -0.59
ECHDC2-220ENST00000498544 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
ECHDC2-220ENST00000498544 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
ECHDC2-220ENST00000498544 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 C3orf79P0CE67 100 aa11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 LINC01545Q5VT33 79 aa11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
ECHDC2-220ENST00000498544 IGKCP01834 107 aa11.31□□□□□ -0.6
ECHDC2-220ENST00000498544 KRTDAPP60985 99 aa11.31□□□□□ -0.6
ECHDC2-220ENST00000498544 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
ECHDC2-220ENST00000498544 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
ECHDC2-220ENST00000498544 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
ECHDC2-220ENST00000498544 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
ECHDC2-220ENST00000498544 FAM30AQ9NZY2 134 aa11.3□□□□□ -0.6
ECHDC2-220ENST00000498544 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
ECHDC2-220ENST00000498544 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
ECHDC2-220ENST00000498544 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
ECHDC2-220ENST00000498544 SNRPEP62304 92 aaKnown RBP11.29□□□□□ -0.6
ECHDC2-220ENST00000498544 CIRBPQ14011 172 aaKnown RBP11.29□□□□□ -0.6
ECHDC2-220ENST00000498544 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
ECHDC2-220ENST00000498544 A0A096LNI7 61 aa11.27□□□□□ -0.61
ECHDC2-220ENST00000498544 C20orf202A1L168 122 aa11.27□□□□□ -0.61
ECHDC2-220ENST00000498544 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
ECHDC2-220ENST00000498544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.27□□□□□ -0.61
ECHDC2-220ENST00000498544 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
ECHDC2-220ENST00000498544 XGP55808 180 aa11.26□□□□□ -0.61
ECHDC2-220ENST00000498544 HERVK_113P61574 105 aa11.26□□□□□ -0.61
ECHDC2-220ENST00000498544 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
ECHDC2-220ENST00000498544 AKR1D1P51857 326 aa11.25□□□□□ -0.61
ECHDC2-220ENST00000498544 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
ECHDC2-220ENST00000498544 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
ECHDC2-220ENST00000498544 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
ECHDC2-220ENST00000498544 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
ECHDC2-220ENST00000498544 PANO1I0J062 215 aa11.24□□□□□ -0.61
ECHDC2-220ENST00000498544 CHTF8P0CG12 524 aa11.24□□□□□ -0.61
ECHDC2-220ENST00000498544 SCXQ7RTU7 201 aa11.24□□□□□ -0.61
ECHDC2-220ENST00000498544 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
ECHDC2-220ENST00000498544 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
ECHDC2-220ENST00000498544 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
ECHDC2-220ENST00000498544 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
ECHDC2-220ENST00000498544 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
ECHDC2-220ENST00000498544 LEPROTO15243 131 aa11.21□□□□□ -0.61
ECHDC2-220ENST00000498544 HAMPP81172 84 aa11.21□□□□□ -0.61
ECHDC2-220ENST00000498544 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
ECHDC2-220ENST00000498544 Q6ZRP5 223 aa11.21□□□□□ -0.61
ECHDC2-220ENST00000498544 CIRBP-AS1Q8TBR5 109 aa11.21□□□□□ -0.61
ECHDC2-220ENST00000498544 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
ECHDC2-220ENST00000498544 E9PLD3 99 aa11.19□□□□□ -0.62
ECHDC2-220ENST00000498544 J3QQQ9 107 aa11.19□□□□□ -0.62
ECHDC2-220ENST00000498544 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
ECHDC2-220ENST00000498544 A0A087WYN8 130 aa11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 COX17Q14061 63 aa11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
ECHDC2-220ENST00000498544 NMUP48645 174 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 HERV-K104P63124 156 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 GAGE2EQ4V326 116 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 STPG4Q8N801 248 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 GAGE2DQ9UEU5 116 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
ECHDC2-220ENST00000498544 MYMXA0A1B0GTQ4 84 aa11.16□□□□□ -0.62
ECHDC2-220ENST00000498544 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
ECHDC2-220ENST00000498544 DNAH8Q96JB1 4490 aa11.15□□□□□ -0.62
ECHDC2-220ENST00000498544 PFN2P35080 140 aa11.14□□□□□ -0.63
ECHDC2-220ENST00000498544 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
ECHDC2-220ENST00000498544 C9orf129Q5T035 196 aaKnown RBP11.13□□□□□ -0.63
ECHDC2-220ENST00000498544 HSPG2P98160 4391 aa11.12□□□□□ -0.63
ECHDC2-220ENST00000498544 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
ECHDC2-220ENST00000498544 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
ECHDC2-220ENST00000498544 Q8N1X5 172 aa11.12□□□□□ -0.63
ECHDC2-220ENST00000498544 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
ECHDC2-220ENST00000498544 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
ECHDC2-220ENST00000498544 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
ECHDC2-220ENST00000498544 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
ECHDC2-220ENST00000498544 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
ECHDC2-220ENST00000498544 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
ECHDC2-220ENST00000498544 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
ECHDC2-220ENST00000498544 LINC00158P58513 81 aa11.09□□□□□ -0.63
ECHDC2-220ENST00000498544 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
ECHDC2-220ENST00000498544 ANKRD39Q53RE8 183 aa11.08□□□□□ -0.64
ECHDC2-220ENST00000498544 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
ECHDC2-220ENST00000498544 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 SMIM13P0DJ93 91 aa11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 FAM19A5Q7Z5A7 132 aaPredicted RBP11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 ABCA13Q86UQ4 5058 aa11.07□□□□□ -0.64
ECHDC2-220ENST00000498544 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
ECHDC2-220ENST00000498544 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
ECHDC2-220ENST00000498544 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
ECHDC2-220ENST00000498544 Q5VSD8 79 aa11.05□□□□□ -0.64
ECHDC2-220ENST00000498544 KRTAP7-1Q8IUC3 87 aa11.05□□□□□ -0.64
ECHDC2-220ENST00000498544 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
ECHDC2-220ENST00000498544 M0QXV9 152 aa11.04□□□□□ -0.64
ECHDC2-220ENST00000498544 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms