RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
FAM3A-220ENST00000497506 A0A096LNI7 61 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 H3BRM9 83 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-220ENST00000497506 PRSS2P07478 247 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 C6orf226Q5I0X4 101 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 Q8N1X5 172 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 SPACA4Q8TDM5 124 aa10.32□□□□□ -0.76
FAM3A-220ENST00000497506 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
FAM3A-220ENST00000497506 F8VRH5 84 aa10.31□□□□□ -0.76
FAM3A-220ENST00000497506 ODF1Q14990 250 aa10.31□□□□□ -0.76
FAM3A-220ENST00000497506 PKIGQ9Y2B9 76 aa10.31□□□□□ -0.76
FAM3A-220ENST00000497506 IGKV2-24A0A0C4DH68 120 aa10.3□□□□□ -0.76
FAM3A-220ENST00000497506 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
FAM3A-220ENST00000497506 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
FAM3A-220ENST00000497506 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
FAM3A-220ENST00000497506 H0Y8G0 127 aa10.29□□□□□ -0.76
FAM3A-220ENST00000497506 CKS1BP61024 79 aa10.29□□□□□ -0.76
FAM3A-220ENST00000497506 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
FAM3A-220ENST00000497506 A0A087WYN8 130 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 TLX1NBP0CAT3 122 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 DPH3Q96FX2 82 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 FAT1Q14517 4588 aa10.28□□□□□ -0.76
FAM3A-220ENST00000497506 GAGE2BQ13066 116 aa10.27□□□□□ -0.77
FAM3A-220ENST00000497506 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.77
FAM3A-220ENST00000497506 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
FAM3A-220ENST00000497506 TMEM223A0PJW6 202 aa10.26□□□□□ -0.77
FAM3A-220ENST00000497506 CXCL5P42830 114 aa10.26□□□□□ -0.77
FAM3A-220ENST00000497506 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
FAM3A-220ENST00000497506 MAP1LC3CQ9BXW4 147 aa10.26□□□□□ -0.77
FAM3A-220ENST00000497506 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
FAM3A-220ENST00000497506 Q6ZRP5 223 aa10.25□□□□□ -0.77
FAM3A-220ENST00000497506 STPG4Q8N801 248 aa10.25□□□□□ -0.77
FAM3A-220ENST00000497506 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
FAM3A-220ENST00000497506 PMCHL2Q9BQD1 86 aa10.24□□□□□ -0.77
FAM3A-220ENST00000497506 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
FAM3A-220ENST00000497506 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
FAM3A-220ENST00000497506 SYS1-DBNDD2H3BUS1 97 aa10.23□□□□□ -0.77
FAM3A-220ENST00000497506 Q5VSD8 79 aa10.23□□□□□ -0.77
FAM3A-220ENST00000497506 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
FAM3A-220ENST00000497506 DPM2O94777 84 aa10.22□□□□□ -0.77
FAM3A-220ENST00000497506 PLNP26678 52 aa10.22□□□□□ -0.77
FAM3A-220ENST00000497506 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
FAM3A-220ENST00000497506 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
FAM3A-220ENST00000497506 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
FAM3A-220ENST00000497506 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
FAM3A-220ENST00000497506 IGKCP01834 107 aa10.2□□□□□ -0.78
FAM3A-220ENST00000497506 C3orf79P0CE67 100 aa10.2□□□□□ -0.78
FAM3A-220ENST00000497506 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
FAM3A-220ENST00000497506 LINC01545Q5VT33 79 aa10.18□□□□□ -0.78
FAM3A-220ENST00000497506 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
FAM3A-220ENST00000497506 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
FAM3A-220ENST00000497506 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
FAM3A-220ENST00000497506 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
FAM3A-220ENST00000497506 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
FAM3A-220ENST00000497506 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
FAM3A-220ENST00000497506 KRTDAPP60985 99 aa10.16□□□□□ -0.78
FAM3A-220ENST00000497506 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
FAM3A-220ENST00000497506 LEPROTO15243 131 aa10.15□□□□□ -0.78
FAM3A-220ENST00000497506 PLA2G1BP04054 148 aaKnown RBP10.15□□□□□ -0.78
FAM3A-220ENST00000497506 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
FAM3A-220ENST00000497506 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
FAM3A-220ENST00000497506 S100A6P06703 90 aa10.14□□□□□ -0.79
FAM3A-220ENST00000497506 TSPEAR-AS2P59090 65 aa10.14□□□□□ -0.79
FAM3A-220ENST00000497506 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
FAM3A-220ENST00000497506 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
FAM3A-220ENST00000497506 RPL37AP61513 92 aaKnown RBP10.13□□□□□ -0.79
FAM3A-220ENST00000497506 HERVK_113P61574 105 aa10.13□□□□□ -0.79
FAM3A-220ENST00000497506 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
FAM3A-220ENST00000497506 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
FAM3A-220ENST00000497506 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
FAM3A-220ENST00000497506 PFN2P35080 140 aa10.12□□□□□ -0.79
FAM3A-220ENST00000497506 SNRPEP62304 92 aaKnown RBP10.12□□□□□ -0.79
FAM3A-220ENST00000497506 FAM19A5Q7Z5A7 132 aaPredicted RBP10.12□□□□□ -0.79
FAM3A-220ENST00000497506 J3QQQ9 107 aa10.11□□□□□ -0.79
FAM3A-220ENST00000497506 S100A2P29034 98 aa10.11□□□□□ -0.79
FAM3A-220ENST00000497506 COX17Q14061 63 aa10.11□□□□□ -0.79
FAM3A-220ENST00000497506 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
FAM3A-220ENST00000497506 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
FAM3A-220ENST00000497506 E9PLD3 99 aa10.1□□□□□ -0.79
FAM3A-220ENST00000497506 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
FAM3A-220ENST00000497506 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
FAM3A-220ENST00000497506 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
FAM3A-220ENST00000497506 HERV-K104P63124 156 aa10.09□□□□□ -0.79
FAM3A-220ENST00000497506 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
FAM3A-220ENST00000497506 SND1-IT1Q9HBX3 110 aa10.08□□□□□ -0.8
FAM3A-220ENST00000497506 C20orf202A1L168 122 aa10.07□□□□□ -0.8
FAM3A-220ENST00000497506 M0QXV9 152 aa10.07□□□□□ -0.8
FAM3A-220ENST00000497506 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
FAM3A-220ENST00000497506 SMIM13P0DJ93 91 aa10.06□□□□□ -0.8
FAM3A-220ENST00000497506 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
FAM3A-220ENST00000497506 NMUP48645 174 aa10.06□□□□□ -0.8
FAM3A-220ENST00000497506 LINC00158P58513 81 aa10.06□□□□□ -0.8
FAM3A-220ENST00000497506 PCLOQ9Y6V0 5065 aa10.06□□□□□ -0.8
FAM3A-220ENST00000497506 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
FAM3A-220ENST00000497506 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
FAM3A-220ENST00000497506 KRTAP11-1Q8IUC1 163 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms