RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
SCAMP3-209ENST00000497470 STPG4Q8N801 248 aa12.8□□□□□ -0.36
SCAMP3-209ENST00000497470 IGLV5-52A0A0A0MRZ9 124 aa12.79□□□□□ -0.36
SCAMP3-209ENST00000497470 MYMXA0A1B0GTQ4 84 aa12.79□□□□□ -0.36
SCAMP3-209ENST00000497470 Q6ZRU5 148 aa12.79□□□□□ -0.36
SCAMP3-209ENST00000497470 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-209ENST00000497470 COX17Q14061 63 aa12.78□□□□□ -0.36
SCAMP3-209ENST00000497470 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
SCAMP3-209ENST00000497470 DNAH2Q9P225 4427 aa12.78□□□□□ -0.36
SCAMP3-209ENST00000497470 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 KRTAP10-2P60368 255 aa12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 UNQ6190/PRO20217Q6UXQ8 127 aa12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 ATOH7Q8N100 152 aa12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 DNAH17Q9UFH2 4485 aa12.77□□□□□ -0.37
SCAMP3-209ENST00000497470 C2orf82Q6UX34 121 aa12.76□□□□□ -0.37
SCAMP3-209ENST00000497470 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
SCAMP3-209ENST00000497470 LOC105371267A0A1B0GV96 52 aa12.75□□□□□ -0.37
SCAMP3-209ENST00000497470 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
SCAMP3-209ENST00000497470 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
SCAMP3-209ENST00000497470 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
SCAMP3-209ENST00000497470 SDIM1Q6ZPB5 146 aa12.74□□□□□ -0.37
SCAMP3-209ENST00000497470 IGKV2D-26A0A0A0MRZ7 120 aa12.73□□□□□ -0.37
SCAMP3-209ENST00000497470 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
SCAMP3-209ENST00000497470 GCSHP23434 173 aa12.73□□□□□ -0.37
SCAMP3-209ENST00000497470 TSPEAR-AS2P59090 65 aa12.73□□□□□ -0.37
SCAMP3-209ENST00000497470 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
SCAMP3-209ENST00000497470 NDUFC2-KCTD14E9PQ53 114 aa12.72□□□□□ -0.37
SCAMP3-209ENST00000497470 SMIM6P0DI80 62 aa12.72□□□□□ -0.37
SCAMP3-209ENST00000497470 VAMP8Q9BV40 100 aa12.72□□□□□ -0.37
SCAMP3-209ENST00000497470 DNAH10Q8IVF4 4471 aa12.71□□□□□ -0.37
SCAMP3-209ENST00000497470 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
SCAMP3-209ENST00000497470 DLEU1O43261 78 aa12.7□□□□□ -0.38
SCAMP3-209ENST00000497470 TIMM17BO60830 172 aa12.7□□□□□ -0.38
SCAMP3-209ENST00000497470 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
SCAMP3-209ENST00000497470 MAJINQ3KP22 176 aa12.69□□□□□ -0.38
SCAMP3-209ENST00000497470 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
SCAMP3-209ENST00000497470 RYR3Q15413 4870 aa12.68□□□□□ -0.38
SCAMP3-209ENST00000497470 S100A12P80511 92 aa12.68□□□□□ -0.38
SCAMP3-209ENST00000497470 FAT2Q9NYQ8 4349 aa12.68□□□□□ -0.38
SCAMP3-209ENST00000497470 ZNF815PA8K554 130 aa12.67□□□□□ -0.38
SCAMP3-209ENST00000497470 COX8AP10176 69 aa12.66□□□□□ -0.38
SCAMP3-209ENST00000497470 Q6ZSA8 131 aa12.66□□□□□ -0.38
SCAMP3-209ENST00000497470 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
SCAMP3-209ENST00000497470 PTTG1IPP53801 180 aa12.65□□□□□ -0.38
SCAMP3-209ENST00000497470 SPATA45Q537H7 98 aa12.65□□□□□ -0.38
SCAMP3-209ENST00000497470 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
SCAMP3-209ENST00000497470 PPDPFQ9H3Y8 114 aa12.65□□□□□ -0.38
SCAMP3-209ENST00000497470 C9orf116Q5BN46 136 aaPredicted RBP12.64□□□□□ -0.39
SCAMP3-209ENST00000497470 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
SCAMP3-209ENST00000497470 LOC107984156A0A0G2JMH3 177 aa12.63□□□□□ -0.39
SCAMP3-209ENST00000497470 Q6ZRP5 223 aa12.63□□□□□ -0.39
SCAMP3-209ENST00000497470 Q6ZVH6 145 aa12.63□□□□□ -0.39
SCAMP3-209ENST00000497470 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
SCAMP3-209ENST00000497470 ARL17AQ8IVW1 177 aa12.63□□□□□ -0.39
SCAMP3-209ENST00000497470 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
SCAMP3-209ENST00000497470 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
SCAMP3-209ENST00000497470 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
SCAMP3-209ENST00000497470 A0A096LNI7 61 aa12.6□□□□□ -0.39
SCAMP3-209ENST00000497470 LINC00158P58513 81 aa12.6□□□□□ -0.39
SCAMP3-209ENST00000497470 SPACA4Q8TDM5 124 aa12.6□□□□□ -0.39
SCAMP3-209ENST00000497470 PLA2G2DQ9UNK4 145 aa12.6□□□□□ -0.39
SCAMP3-209ENST00000497470 TMEM238C9JI98 176 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 SMIM13P0DJ93 91 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 PFN2P35080 140 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 RPL18AQ02543 176 aaKnown RBP12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 LITAFQ99732 161 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
SCAMP3-209ENST00000497470 COPS9Q8WXC6 57 aa12.58□□□□□ -0.4
SCAMP3-209ENST00000497470 FUSP35637 526 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 SPANXB1Q9NS25 103 aaPredicted RBP12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 SPANXCQ9NY87 97 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 HIGD1BQ9P298 99 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 PKD1P98161 4303 aa12.57□□□□□ -0.4
SCAMP3-209ENST00000497470 IFITM1P13164 125 aa12.56□□□□□ -0.4
SCAMP3-209ENST00000497470 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
SCAMP3-209ENST00000497470 PLAC8Q9NZF1 115 aa12.55□□□□□ -0.4
SCAMP3-209ENST00000497470 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
SCAMP3-209ENST00000497470 C9orf129Q5T035 196 aaKnown RBP12.54□□□□□ -0.4
SCAMP3-209ENST00000497470 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
SCAMP3-209ENST00000497470 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
SCAMP3-209ENST00000497470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.54□□□□□ -0.4
SCAMP3-209ENST00000497470 DNAH11Q96DT5 4516 aa12.53□□□□□ -0.4
SCAMP3-209ENST00000497470 IGLV5-37A0A075B6J1 123 aa12.52□□□□□ -0.41
SCAMP3-209ENST00000497470 CDK2AP2O75956 126 aa12.52□□□□□ -0.41
SCAMP3-209ENST00000497470 ADAMTSL4-AS1Q5T5F5 129 aa12.52□□□□□ -0.41
SCAMP3-209ENST00000497470 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
SCAMP3-209ENST00000497470 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
SCAMP3-209ENST00000497470 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
SCAMP3-209ENST00000497470 NDUFC2O95298 119 aa12.51□□□□□ -0.41
SCAMP3-209ENST00000497470 RPL24P83731 157 aaKnown RBP12.51□□□□□ -0.41
SCAMP3-209ENST00000497470 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
SCAMP3-209ENST00000497470 HECTD4Q9Y4D8 3996 aa12.5□□□□□ -0.41
SCAMP3-209ENST00000497470 A0A087WYN8 130 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms