RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
COL9A2-210ENST00000495948 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
COL9A2-210ENST00000495948 TOMM7Q9P0U1 55 aa12.66□□□□□ -0.38
COL9A2-210ENST00000495948 HSBP1O75506 76 aa12.65□□□□□ -0.38
COL9A2-210ENST00000495948 SCO1O75880 301 aa12.64□□□□□ -0.39
COL9A2-210ENST00000495948 CXCL5P42830 114 aa12.64□□□□□ -0.39
COL9A2-210ENST00000495948 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
COL9A2-210ENST00000495948 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
COL9A2-210ENST00000495948 NDUFA6P56556 154 aa12.63□□□□□ -0.39
COL9A2-210ENST00000495948 H3BRM9 83 aa12.62□□□□□ -0.39
COL9A2-210ENST00000495948 LINC00310P59036 64 aa12.62□□□□□ -0.39
COL9A2-210ENST00000495948 CKS1BP61024 79 aa12.62□□□□□ -0.39
COL9A2-210ENST00000495948 C6orf226Q5I0X4 101 aa12.62□□□□□ -0.39
COL9A2-210ENST00000495948 SRRM2Q9UQ35 2752 aaKnown RBP12.62□□□□□ -0.39
COL9A2-210ENST00000495948 SERF1AO75920 110 aa12.61□□□□□ -0.39
COL9A2-210ENST00000495948 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
COL9A2-210ENST00000495948 IFI27L1Q96BM0 104 aa12.61□□□□□ -0.39
COL9A2-210ENST00000495948 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
COL9A2-210ENST00000495948 SPINK8P0C7L1 97 aa12.6□□□□□ -0.39
COL9A2-210ENST00000495948 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-210ENST00000495948 Q6ZRP5 223 aa12.6□□□□□ -0.39
COL9A2-210ENST00000495948 NDUFC2-KCTD14E9PQ53 114 aa12.59□□□□□ -0.39
COL9A2-210ENST00000495948 F8VRH5 84 aa12.59□□□□□ -0.39
COL9A2-210ENST00000495948 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
COL9A2-210ENST00000495948 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
COL9A2-210ENST00000495948 IGLV5-39A0A0G2JS06 123 aa12.57□□□□□ -0.4
COL9A2-210ENST00000495948 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
COL9A2-210ENST00000495948 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
COL9A2-210ENST00000495948 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-210ENST00000495948 A0A1W2PNN7 141 aa12.55□□□□□ -0.4
COL9A2-210ENST00000495948 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
COL9A2-210ENST00000495948 MYCBP2O75592 4640 aa12.55□□□□□ -0.4
COL9A2-210ENST00000495948 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
COL9A2-210ENST00000495948 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
COL9A2-210ENST00000495948 TMEM170BQ5T4T1 132 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
COL9A2-210ENST00000495948 NUPR1O60356 82 aa12.52□□□□□ -0.41
COL9A2-210ENST00000495948 FLG2Q5D862 2391 aaPredicted RBP12.51□□□□□ -0.41
COL9A2-210ENST00000495948 PRR3P79522 188 aaKnown RBP12.51□□□□□ -0.41
COL9A2-210ENST00000495948 HSPB8Q9UJY1 196 aa12.51□□□□□ -0.41
COL9A2-210ENST00000495948 PKHD1L1Q86WI1 4243 aa12.51□□□□□ -0.41
COL9A2-210ENST00000495948 HNRNPA3P51991 378 aaKnown RBP12.49□□□□□ -0.41
COL9A2-210ENST00000495948 ODF1Q14990 250 aa12.49□□□□□ -0.41
COL9A2-210ENST00000495948 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
COL9A2-210ENST00000495948 FAM168BA1KXE4 195 aa12.48□□□□□ -0.41
COL9A2-210ENST00000495948 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
COL9A2-210ENST00000495948 FAM19A5Q7Z5A7 132 aaPredicted RBP12.47□□□□□ -0.41
COL9A2-210ENST00000495948 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
COL9A2-210ENST00000495948 H0Y8G0 127 aa12.46□□□□□ -0.41
COL9A2-210ENST00000495948 FABP4P15090 132 aa12.45□□□□□ -0.42
COL9A2-210ENST00000495948 PHF5AQ7RTV0 110 aaKnown RBP12.45□□□□□ -0.42
COL9A2-210ENST00000495948 M0QXV9 152 aa12.44□□□□□ -0.42
COL9A2-210ENST00000495948 KRTAP7-1Q8IUC3 87 aa12.44□□□□□ -0.42
COL9A2-210ENST00000495948 PLNP26678 52 aa12.43□□□□□ -0.42
COL9A2-210ENST00000495948 XAGE1AQ9HD64 81 aa12.43□□□□□ -0.42
COL9A2-210ENST00000495948 KRTAP29-1A8MX34 341 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-210ENST00000495948 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-210ENST00000495948 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
COL9A2-210ENST00000495948 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
COL9A2-210ENST00000495948 COX17Q14061 63 aa12.4□□□□□ -0.42
COL9A2-210ENST00000495948 SERTAD4-AS1Q5TG53 156 aa12.4□□□□□ -0.42
COL9A2-210ENST00000495948 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
COL9A2-210ENST00000495948 DPM2O94777 84 aa12.39□□□□□ -0.43
COL9A2-210ENST00000495948 PSORS1C2Q9UIG4 136 aa12.39□□□□□ -0.43
COL9A2-210ENST00000495948 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-210ENST00000495948 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
COL9A2-210ENST00000495948 OXTP01178 125 aa12.37□□□□□ -0.43
COL9A2-210ENST00000495948 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
COL9A2-210ENST00000495948 PLA2G2DQ9UNK4 145 aa12.37□□□□□ -0.43
COL9A2-210ENST00000495948 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
COL9A2-210ENST00000495948 IGKCP01834 107 aa12.36□□□□□ -0.43
COL9A2-210ENST00000495948 PFN2P35080 140 aa12.36□□□□□ -0.43
COL9A2-210ENST00000495948 UBE2BP63146 152 aa12.36□□□□□ -0.43
COL9A2-210ENST00000495948 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
COL9A2-210ENST00000495948 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
COL9A2-210ENST00000495948 HERVK_113P61574 105 aa12.34□□□□□ -0.43
COL9A2-210ENST00000495948 KRTAP11-1Q8IUC1 163 aa12.34□□□□□ -0.43
COL9A2-210ENST00000495948 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
COL9A2-210ENST00000495948 IGLV5-37A0A075B6J1 123 aa12.33□□□□□ -0.44
COL9A2-210ENST00000495948 J3QL48 77 aa12.33□□□□□ -0.44
COL9A2-210ENST00000495948 HERV-K104P63124 156 aa12.33□□□□□ -0.44
COL9A2-210ENST00000495948 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
COL9A2-210ENST00000495948 C1orf137Q5JT78 98 aa12.33□□□□□ -0.44
COL9A2-210ENST00000495948 SPINK6Q6UWN8 80 aa12.33□□□□□ -0.44
COL9A2-210ENST00000495948 MRPL55Q7Z7F7 128 aaKnown RBP12.32□□□□□ -0.44
COL9A2-210ENST00000495948 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
COL9A2-210ENST00000495948 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
COL9A2-210ENST00000495948 LEPROTO15243 131 aa12.31□□□□□ -0.44
COL9A2-210ENST00000495948 TSPEAR-AS2P59090 65 aa12.31□□□□□ -0.44
COL9A2-210ENST00000495948 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms