RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
HDAC6-235ENST00000495515 Q6ZSA8 131 aa11□□□□□ -0.65
HDAC6-235ENST00000495515 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
HDAC6-235ENST00000495515 LOC107984640A0A0U1RRK4 108 aa10.99□□□□□ -0.65
HDAC6-235ENST00000495515 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
HDAC6-235ENST00000495515 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
HDAC6-235ENST00000495515 FAM30AQ9NZY2 134 aa10.98□□□□□ -0.65
HDAC6-235ENST00000495515 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
HDAC6-235ENST00000495515 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
HDAC6-235ENST00000495515 IGKCP01834 107 aa10.97□□□□□ -0.65
HDAC6-235ENST00000495515 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
HDAC6-235ENST00000495515 DPH3Q96FX2 82 aa10.97□□□□□ -0.65
HDAC6-235ENST00000495515 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
HDAC6-235ENST00000495515 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.65
HDAC6-235ENST00000495515 KRTDAPP60985 99 aa10.96□□□□□ -0.65
HDAC6-235ENST00000495515 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
HDAC6-235ENST00000495515 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
HDAC6-235ENST00000495515 C20orf202A1L168 122 aa10.95□□□□□ -0.66
HDAC6-235ENST00000495515 C3orf79P0CE67 100 aa10.95□□□□□ -0.66
HDAC6-235ENST00000495515 XGP55808 180 aa10.95□□□□□ -0.66
HDAC6-235ENST00000495515 HERVK_113P61574 105 aa10.95□□□□□ -0.66
HDAC6-235ENST00000495515 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
HDAC6-235ENST00000495515 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
HDAC6-235ENST00000495515 RPL18AQ02543 176 aaKnown RBP10.94□□□□□ -0.66
HDAC6-235ENST00000495515 LINC01545Q5VT33 79 aa10.94□□□□□ -0.66
HDAC6-235ENST00000495515 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-235ENST00000495515 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
HDAC6-235ENST00000495515 A0A096LNI7 61 aa10.93□□□□□ -0.66
HDAC6-235ENST00000495515 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
HDAC6-235ENST00000495515 AKR1D1P51857 326 aa10.93□□□□□ -0.66
HDAC6-235ENST00000495515 SNRPEP62304 92 aaKnown RBP10.93□□□□□ -0.66
HDAC6-235ENST00000495515 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
HDAC6-235ENST00000495515 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
HDAC6-235ENST00000495515 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
HDAC6-235ENST00000495515 CHTF8P0CG12 524 aa10.92□□□□□ -0.66
HDAC6-235ENST00000495515 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
HDAC6-235ENST00000495515 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
HDAC6-235ENST00000495515 SCXQ7RTU7 201 aa10.92□□□□□ -0.66
HDAC6-235ENST00000495515 HIST1H2BLQ99880 126 aa10.92□□□□□ -0.66
HDAC6-235ENST00000495515 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
HDAC6-235ENST00000495515 CIRBP-AS1Q8TBR5 109 aa10.91□□□□□ -0.66
HDAC6-235ENST00000495515 RYR1P21817 5038 aa10.91□□□□□ -0.66
HDAC6-235ENST00000495515 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
HDAC6-235ENST00000495515 HAMPP81172 84 aa10.9□□□□□ -0.66
HDAC6-235ENST00000495515 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
HDAC6-235ENST00000495515 PANO1I0J062 215 aa10.89□□□□□ -0.67
HDAC6-235ENST00000495515 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-235ENST00000495515 A0A087WYN8 130 aa10.88□□□□□ -0.67
HDAC6-235ENST00000495515 LEPROTO15243 131 aa10.88□□□□□ -0.67
HDAC6-235ENST00000495515 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
HDAC6-235ENST00000495515 Q6ZRP5 223 aa10.88□□□□□ -0.67
HDAC6-235ENST00000495515 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
HDAC6-235ENST00000495515 STPG4Q8N801 248 aa10.87□□□□□ -0.67
HDAC6-235ENST00000495515 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-235ENST00000495515 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
HDAC6-235ENST00000495515 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
HDAC6-235ENST00000495515 LGALS3P17931 250 aaKnown RBP10.85□□□□□ -0.67
HDAC6-235ENST00000495515 HERV-K104P63124 156 aa10.85□□□□□ -0.67
HDAC6-235ENST00000495515 COX17Q14061 63 aa10.85□□□□□ -0.67
HDAC6-235ENST00000495515 NDUFA12Q9UI09 145 aa10.85□□□□□ -0.67
HDAC6-235ENST00000495515 LINC00587B1AMM8 73 aa10.84□□□□□ -0.67
HDAC6-235ENST00000495515 E9PLD3 99 aa10.84□□□□□ -0.67
HDAC6-235ENST00000495515 J3QQQ9 107 aa10.84□□□□□ -0.67
HDAC6-235ENST00000495515 NMUP48645 174 aa10.84□□□□□ -0.67
HDAC6-235ENST00000495515 ERG28Q9UKR5 140 aa10.84□□□□□ -0.67
HDAC6-235ENST00000495515 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-235ENST00000495515 PFN2P35080 140 aa10.83□□□□□ -0.68
HDAC6-235ENST00000495515 Q8N1X5 172 aa10.83□□□□□ -0.68
HDAC6-235ENST00000495515 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
HDAC6-235ENST00000495515 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
HDAC6-235ENST00000495515 MEIG1Q5JSS6 88 aa10.81□□□□□ -0.68
HDAC6-235ENST00000495515 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
HDAC6-235ENST00000495515 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
HDAC6-235ENST00000495515 C7orf33Q8WU49 177 aa10.8□□□□□ -0.68
HDAC6-235ENST00000495515 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
HDAC6-235ENST00000495515 HSPG2P98160 4391 aa10.79□□□□□ -0.68
HDAC6-235ENST00000495515 LINC00158P58513 81 aa10.79□□□□□ -0.68
HDAC6-235ENST00000495515 C9orf129Q5T035 196 aaKnown RBP10.79□□□□□ -0.68
HDAC6-235ENST00000495515 KRTAP4-5Q9BYR2 181 aa10.79□□□□□ -0.68
HDAC6-235ENST00000495515 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
HDAC6-235ENST00000495515 TMA7Q9Y2S6 64 aaKnown RBP10.79□□□□□ -0.68
HDAC6-235ENST00000495515 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
HDAC6-235ENST00000495515 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
HDAC6-235ENST00000495515 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
HDAC6-235ENST00000495515 ATOH7Q8N100 152 aa10.78□□□□□ -0.68
HDAC6-235ENST00000495515 SCGB1D1O95968 90 aa10.77□□□□□ -0.69
HDAC6-235ENST00000495515 HSBP1L1C9JCN9 74 aa10.76□□□□□ -0.69
HDAC6-235ENST00000495515 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
HDAC6-235ENST00000495515 Q5VSD8 79 aa10.76□□□□□ -0.69
HDAC6-235ENST00000495515 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-235ENST00000495515 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
HDAC6-235ENST00000495515 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
HDAC6-235ENST00000495515 SND1-IT1Q9HBX3 110 aa10.75□□□□□ -0.69
HDAC6-235ENST00000495515 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
HDAC6-235ENST00000495515 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
HDAC6-235ENST00000495515 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
HDAC6-235ENST00000495515 ZNF815PA8K554 130 aa10.72□□□□□ -0.69
HDAC6-235ENST00000495515 M0QXV9 152 aa10.72□□□□□ -0.69
HDAC6-235ENST00000495515 RPL37AP61513 92 aaKnown RBP10.72□□□□□ -0.69
HDAC6-235ENST00000495515 ANKRD39Q53RE8 183 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms