RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 LINC01545Q5VT33 79 aa4.95□□□□□ -1.62
VEGFA-214ENST00000493786 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
VEGFA-214ENST00000493786 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
VEGFA-214ENST00000493786 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
VEGFA-214ENST00000493786 Q6ZRU5 148 aa4.94□□□□□ -1.62
VEGFA-214ENST00000493786 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
VEGFA-214ENST00000493786 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 IGLV5-39A0A0G2JS06 123 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 KIAA0087Q14695 138 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 C12orf57Q99622 126 aa4.93□□□□□ -1.62
VEGFA-214ENST00000493786 LOC107984640A0A0U1RRK4 108 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 LEPROTO15243 131 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 SCGB1D1O95968 90 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 SLPIP03973 132 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
VEGFA-214ENST00000493786 RPL18AQ02543 176 aaKnown RBP4.92□□□□□ -1.62
VEGFA-214ENST00000493786 LINC01620Q4KN68 170 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
VEGFA-214ENST00000493786 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
VEGFA-214ENST00000493786 PKD1P98161 4303 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 KRTAP10-1P60331 282 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 C6orf48Q9UBA6 75 aa4.91□□□□□ -1.62
VEGFA-214ENST00000493786 PKHD1P08F94 4074 aa4.9□□□□□ -1.62
VEGFA-214ENST00000493786 J3QQQ9 107 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 NMUP48645 174 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 HERV-K104P63124 156 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 SDIM1Q6ZPB5 146 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 NDUFA12Q9UI09 145 aa4.9□□□□□ -1.63
VEGFA-214ENST00000493786 IGKV2-24A0A0C4DH68 120 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 LINC00587B1AMM8 73 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 E9PLD3 99 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 NDUFC2-KCTD14E9PQ53 114 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 GAGE2BQ13066 116 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 STPG4Q8N801 248 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
VEGFA-214ENST00000493786 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
VEGFA-214ENST00000493786 A0A096LNI7 61 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 TLX1NBP0CAT3 122 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 PFN2P35080 140 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 COX17Q14061 63 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 GAGE2EQ4V326 116 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
VEGFA-214ENST00000493786 GAGE2DQ9UEU5 116 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 ERG28Q9UKR5 140 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 DYNC1H1Q14204 4646 aaKnown RBP4.88□□□□□ -1.63
VEGFA-214ENST00000493786 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
VEGFA-214ENST00000493786 CHTF8P0CG12 524 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 SMIM6P0DI80 62 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 LINC00158P58513 81 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 CIRBPQ14011 172 aaKnown RBP4.87□□□□□ -1.63
VEGFA-214ENST00000493786 Q6ZRP5 223 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 Q6ZSA8 131 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 SPACA4Q8TDM5 124 aa4.87□□□□□ -1.63
VEGFA-214ENST00000493786 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
VEGFA-214ENST00000493786 CDK2AP2O75956 126 aa4.86□□□□□ -1.63
VEGFA-214ENST00000493786 JOSD1Q15040 202 aaPredicted RBP4.86□□□□□ -1.63
VEGFA-214ENST00000493786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
VEGFA-214ENST00000493786 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 ANKRD39Q53RE8 183 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 VAMP8Q9BV40 100 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
VEGFA-214ENST00000493786 A0A087WYN8 130 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 J3QL48 77 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 SMIM13P0DJ93 91 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 HAMPP81172 84 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 SCXQ7RTU7 201 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 MIEN1Q9BRT3 115 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 XAGE1AQ9HD64 81 aa4.84□□□□□ -1.63
VEGFA-214ENST00000493786 RYR1P21817 5038 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 PANO1I0J062 215 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
VEGFA-214ENST00000493786 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 CIRBP-AS1Q8TBR5 109 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 C7orf33Q8WU49 177 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 PAM16Q9Y3D7 125 aa4.83□□□□□ -1.64
VEGFA-214ENST00000493786 TMEM238C9JI98 176 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 TIMM17BO60830 172 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 XGP55808 180 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 RPL24P83731 157 aaKnown RBP4.82□□□□□ -1.64
VEGFA-214ENST00000493786 SPATA45Q537H7 98 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms