RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
CLCNKA-206ENST00000491433 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
CLCNKA-206ENST00000491433 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
CLCNKA-206ENST00000491433 AMELXQ99217 191 aa6.86□□□□□ -1.31
CLCNKA-206ENST00000491433 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
CLCNKA-206ENST00000491433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.85□□□□□ -1.31
CLCNKA-206ENST00000491433 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
CLCNKA-206ENST00000491433 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
CLCNKA-206ENST00000491433 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
CLCNKA-206ENST00000491433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 FGF6P10767 208 aa6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 CARD19Q96LW7 228 aa6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
CLCNKA-206ENST00000491433 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
CLCNKA-206ENST00000491433 KRTDAPP60985 99 aa6.83□□□□□ -1.32
CLCNKA-206ENST00000491433 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
CLCNKA-206ENST00000491433 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
CLCNKA-206ENST00000491433 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 PMVKQ15126 192 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 AMMECR1LQ6DCA0 310 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 DIRC1Q969H9 104 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 CST9LQ9H4G1 147 aa6.82□□□□□ -1.32
CLCNKA-206ENST00000491433 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
CLCNKA-206ENST00000491433 AKR1D1P51857 326 aa6.81□□□□□ -1.32
CLCNKA-206ENST00000491433 Q6ZN92 141 aa6.81□□□□□ -1.32
CLCNKA-206ENST00000491433 TEX43Q6ZNM6 134 aa6.81□□□□□ -1.32
CLCNKA-206ENST00000491433 LINC00518Q8N0U6 118 aa6.81□□□□□ -1.32
CLCNKA-206ENST00000491433 IGLV4-69A0A075B6H9 119 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 F8VRH5 84 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 PRR4Q16378 134 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 Q6ZUT4 128 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 TMEM101Q96IK0 257 aa6.8□□□□□ -1.32
CLCNKA-206ENST00000491433 FOXI1Q12951 378 aa6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 VCX2Q9H322 139 aa6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 MRPL35Q9NZE8 188 aaKnown RBP6.79□□□□□ -1.32
CLCNKA-206ENST00000491433 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 SCGB1D1O95968 90 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 IGLC3P0DOY3 106 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 UBE2D1P51668 147 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 GAGE2BQ13066 116 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 OR5A1Q8NGJ0 315 aa6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
CLCNKA-206ENST00000491433 C20orf202A1L168 122 aa6.77□□□□□ -1.33
CLCNKA-206ENST00000491433 CCL25O15444 150 aa6.77□□□□□ -1.33
CLCNKA-206ENST00000491433 RPL13AP40429 203 aaKnown RBP6.77□□□□□ -1.33
CLCNKA-206ENST00000491433 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 DPM2O94777 84 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 IGKCP01834 107 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 PLNP26678 52 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 XCL1P47992 114 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 SS18Q15532 418 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 LINC00242Q5T6M2 205 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 PMCHL2Q9BQD1 86 aa6.76□□□□□ -1.33
CLCNKA-206ENST00000491433 C11orf86A6NJI1 115 aa6.75□□□□□ -1.33
CLCNKA-206ENST00000491433 H0Y9J4 135 aa6.75□□□□□ -1.33
CLCNKA-206ENST00000491433 RNASE13Q5GAN3 156 aaKnown RBP6.75□□□□□ -1.33
CLCNKA-206ENST00000491433 C12orf57Q99622 126 aa6.75□□□□□ -1.33
CLCNKA-206ENST00000491433 LINC00959A0A1B0GUT2 108 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 H0Y8G0 127 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 SEC11AP67812 179 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
CLCNKA-206ENST00000491433 IGHV3OR16-9A0A0B4J2B5 98 aa6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 APOMO95445 188 aa6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 MALP21145 153 aa6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 CD164L2Q6UWJ8 174 aa6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
CLCNKA-206ENST00000491433 TMEM223A0PJW6 202 aa6.72□□□□□ -1.33
CLCNKA-206ENST00000491433 HERVK_113P63121 156 aa6.72□□□□□ -1.33
CLCNKA-206ENST00000491433 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
CLCNKA-206ENST00000491433 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
CLCNKA-206ENST00000491433 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
CLCNKA-206ENST00000491433 A0A087WZ39 114 aa6.71□□□□□ -1.34
CLCNKA-206ENST00000491433 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
CLCNKA-206ENST00000491433 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
CLCNKA-206ENST00000491433 C2orf48Q96LS8 159 aa6.71□□□□□ -1.34
CLCNKA-206ENST00000491433 TRAV13-1A0A0B4J241 112 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 E9PLD3 99 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 S100A12P80511 92 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 VAMP8Q9BV40 100 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms