RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SMIM2Q9BVW6 85 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 CSDC2Q9Y534 153 aaKnown RBP5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 HBDP02042 147 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 TEX43Q6ZNM6 134 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 C2orf48Q96LS8 159 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 C20orf78Q9BR46 151 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 PSORS1C2Q9UIG4 136 aa5.16□□□□□ -1.58
APOBEC3F-204ENST00000491387 A0A096LNJ9 63 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 C20orf202A1L168 122 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 APOMO95445 188 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 GAGE2BQ13066 116 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 C10orf25Q5T742 122 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 LINC00173Q6ZV60 143 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 KRTAP11-1Q8IUC1 163 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 MAP1LC3CQ9BXW4 147 aa5.15□□□□□ -1.59
APOBEC3F-204ENST00000491387 FAM168BA1KXE4 195 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 TSTD3H0UI37 97 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 K7EMI3 77 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 COX7A2LO14548 114 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 RPL32P62910 135 aaKnown RBP5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 PET117Q6UWS5 81 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 KIR2DL4Q99706 377 aa5.14□□□□□ -1.59
APOBEC3F-204ENST00000491387 F8WDY8 70 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 MALP21145 153 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 ORMDL2Q53FV1 153 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 PHF5AQ7RTV0 110 aaKnown RBP5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 ORAOV1Q8WV07 137 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 CAMK2N2Q96S95 79 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 VAMP8Q9BV40 100 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 TIMM21Q9BVV7 248 aa5.13□□□□□ -1.59
APOBEC3F-204ENST00000491387 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 IGHV3OR16-9A0A0B4J2B5 98 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 IGLV7-43P04211 117 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 RPL18AQ02543 176 aaKnown RBP5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 SMAGPQ0VAQ4 97 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 C1orf137Q5JT78 98 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 LINC01545Q5VT33 79 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 DIRC1Q969H9 104 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 IFI27L1Q96BM0 104 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 PRO1933Q9H354 126 aa5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 MRPL35Q9NZE8 188 aaKnown RBP5.12□□□□□ -1.59
APOBEC3F-204ENST00000491387 IGLV1-50A0A075B6I6 118 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 H0Y8G0 127 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 H0Y9J4 135 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 ATP5LO75964 103 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 ATOH7Q8N100 152 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 PRR26Q8N8Z3 221 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
APOBEC3F-204ENST00000491387 LINC01549A6NIU2 74 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 G0S2P27469 103 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 KIAA0087Q14695 138 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 LINC00242Q5T6M2 205 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 TOMM6Q96B49 74 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 SPANXA1Q9NS26 97 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 MUC2Q02817 5179 aa5.1□□□□□ -1.59
APOBEC3F-204ENST00000491387 LINC00587B1AMM8 73 aa5.09□□□□□ -1.59
APOBEC3F-204ENST00000491387 DDTP30046 118 aa5.09□□□□□ -1.59
APOBEC3F-204ENST00000491387 MRPS36P82909 103 aaKnown RBP5.09□□□□□ -1.59
APOBEC3F-204ENST00000491387 C2orf66Q6UXQ4 117 aa5.09□□□□□ -1.59
APOBEC3F-204ENST00000491387 HSBP1L1C9JCN9 74 aa5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 UBE2D1P51668 147 aa5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 Q6ZN92 141 aa5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 FAM19A5Q7Z5A7 132 aaPredicted RBP5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 SCGB3A1Q96QR1 104 aa5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 CYSLTR1Q9Y271 337 aa5.08□□□□□ -1.6
APOBEC3F-204ENST00000491387 A0A087WZ39 114 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 NDUFA1O15239 70 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 RPL13AP40429 203 aaKnown RBP5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 ERASQ7Z444 233 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 TMEM141Q96I45 108 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 MIEN1Q9BRT3 115 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
APOBEC3F-204ENST00000491387 TRAV12-1A0A0B4J245 112 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 IGIPA6NJ69 53 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 IGLC3P0DOY3 106 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 C9orf129Q5T035 196 aaKnown RBP5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 LINC00469Q8N7U9 141 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 AMELXQ99217 191 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 TIMM17AQ99595 171 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 UQCR10Q9UDW1 63 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 PYGO1Q9Y3Y4 419 aa5.06□□□□□ -1.6
APOBEC3F-204ENST00000491387 DPM2O94777 84 aa5.05□□□□□ -1.6
APOBEC3F-204ENST00000491387 IGKCP01834 107 aa5.05□□□□□ -1.6
APOBEC3F-204ENST00000491387 TRBV30A0A0K0K1B3 111 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms