RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.29
VPS13D-210ENST00000489961 IGLV5-39A0A0G2JS06 123 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 DPM2O94777 84 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 HAMPP81172 84 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 C10orf25Q5T742 122 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
VPS13D-210ENST00000489961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-210ENST00000489961 A0A096LNI7 61 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 TMEM223A0PJW6 202 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 SYS1-DBNDD2H3BUS1 97 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 RPL18AQ02543 176 aaKnown RBP6.95□□□□□ -1.3
VPS13D-210ENST00000489961 CIRBPQ14011 172 aaKnown RBP6.95□□□□□ -1.3
VPS13D-210ENST00000489961 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
VPS13D-210ENST00000489961 IGKCP01834 107 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 TLX1NBP0CAT3 122 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 S100A2P29034 98 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 MAJINQ3KP22 176 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 SPACA4Q8TDM5 124 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
VPS13D-210ENST00000489961 PANO1I0J062 215 aa6.93□□□□□ -1.3
VPS13D-210ENST00000489961 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
VPS13D-210ENST00000489961 KRTDAPP60985 99 aa6.93□□□□□ -1.3
VPS13D-210ENST00000489961 A0A087WYN8 130 aa6.92□□□□□ -1.3
VPS13D-210ENST00000489961 HERVK_113P61574 105 aa6.92□□□□□ -1.3
VPS13D-210ENST00000489961 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-210ENST00000489961 LINC01545Q5VT33 79 aa6.92□□□□□ -1.3
VPS13D-210ENST00000489961 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
VPS13D-210ENST00000489961 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
VPS13D-210ENST00000489961 C20orf202A1L168 122 aa6.91□□□□□ -1.3
VPS13D-210ENST00000489961 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
VPS13D-210ENST00000489961 SMR3BP02814 79 aaPredicted RBP6.91□□□□□ -1.3
VPS13D-210ENST00000489961 Q6ZRP5 223 aa6.91□□□□□ -1.3
VPS13D-210ENST00000489961 Q8N1X5 172 aa6.91□□□□□ -1.3
VPS13D-210ENST00000489961 STPG4Q8N801 248 aa6.91□□□□□ -1.3
VPS13D-210ENST00000489961 GAGE2EQ4V326 116 aa6.9□□□□□ -1.3
VPS13D-210ENST00000489961 PLEKHB2Q96CS7 222 aa6.9□□□□□ -1.3
VPS13D-210ENST00000489961 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.3
VPS13D-210ENST00000489961 GAGE2DQ9UEU5 116 aa6.9□□□□□ -1.3
VPS13D-210ENST00000489961 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
VPS13D-210ENST00000489961 LEPROTO15243 131 aa6.89□□□□□ -1.31
VPS13D-210ENST00000489961 SNRPEP62304 92 aaKnown RBP6.89□□□□□ -1.31
VPS13D-210ENST00000489961 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
VPS13D-210ENST00000489961 AKR1D1P51857 326 aa6.88□□□□□ -1.31
VPS13D-210ENST00000489961 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
VPS13D-210ENST00000489961 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
VPS13D-210ENST00000489961 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 PFN2P35080 140 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 HERV-K104P63124 156 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 COX17Q14061 63 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 ERG28Q9UKR5 140 aa6.87□□□□□ -1.31
VPS13D-210ENST00000489961 APOBP04114 4563 aaKnown RBP6.87□□□□□ -1.31
VPS13D-210ENST00000489961 KIAA1109Q2LD37 5005 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 E9PLD3 99 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 J3QQQ9 107 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
VPS13D-210ENST00000489961 Q5VSD8 79 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 NDUFA12Q9UI09 145 aa6.86□□□□□ -1.31
VPS13D-210ENST00000489961 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
VPS13D-210ENST00000489961 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
VPS13D-210ENST00000489961 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
VPS13D-210ENST00000489961 NMUP48645 174 aa6.85□□□□□ -1.31
VPS13D-210ENST00000489961 TSPEAR-AS2P59090 65 aa6.85□□□□□ -1.31
VPS13D-210ENST00000489961 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
VPS13D-210ENST00000489961 XAGE1AQ9HD64 81 aa6.85□□□□□ -1.31
VPS13D-210ENST00000489961 LINC00158P58513 81 aa6.84□□□□□ -1.31
VPS13D-210ENST00000489961 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
VPS13D-210ENST00000489961 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-210ENST00000489961 HSPG2P98160 4391 aa6.83□□□□□ -1.32
VPS13D-210ENST00000489961 RYR1P21817 5038 aa6.83□□□□□ -1.32
VPS13D-210ENST00000489961 FAM168BA1KXE4 195 aa6.83□□□□□ -1.32
VPS13D-210ENST00000489961 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
VPS13D-210ENST00000489961 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
VPS13D-210ENST00000489961 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
VPS13D-210ENST00000489961 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
VPS13D-210ENST00000489961 M0QXV9 152 aa6.81□□□□□ -1.32
VPS13D-210ENST00000489961 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
VPS13D-210ENST00000489961 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
VPS13D-210ENST00000489961 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
VPS13D-210ENST00000489961 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
VPS13D-210ENST00000489961 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
VPS13D-210ENST00000489961 SERTAD4-AS1Q5TG53 156 aa6.8□□□□□ -1.32
VPS13D-210ENST00000489961 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 LBHQ53QV2 105 aaPredicted RBP6.79□□□□□ -1.32
VPS13D-210ENST00000489961 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 MIR7-3HGQ8N6C7 128 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms