RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
CDHR3-213ENST00000488386 ORMDL3Q8N138 153 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 LITAFQ99732 161 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IGHV3OR16-9A0A0B4J2B5 98 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 APOMO95445 188 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 RAB5AP20339 215 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 ATP5L2Q7Z4Y8 100 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IMMP2LQ96T52 175 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 PPBPP02775 128 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MT-ND4LP03901 98 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
CDHR3-213ENST00000488386 SMAGPQ0VAQ4 97 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00173Q6ZV60 143 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 FAM19A5Q7Z5A7 132 aaPredicted RBP3.63□□□□□ -1.83
CDHR3-213ENST00000488386 Q8N8P6 123 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 SEC11CQ9BY50 192 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MAP1LC3AQ9H492 121 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 NDUFA1O15239 70 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 UBE2D1P51668 147 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 KIAA0087Q14695 138 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 C10orf91Q5T1B1 145 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TEX43Q6ZNM6 134 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 Q6ZRP5 223 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 OR10D4PQ8NGN7 298 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TMEM141Q96I45 108 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TOMM7Q9P0U1 55 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00474Q9P2X8 69 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 TMEM218A2RU14 115 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 COMMD7Q86VX2 200 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00469Q8N7U9 141 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 CARHSP1Q9Y2V2 147 aaKnown RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 PYGO1Q9Y3Y4 419 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 LRP2P98164 4655 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 A0A087WZ39 114 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 MT-ND6P03923 174 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 RHEBQ15382 184 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
CDHR3-213ENST00000488386 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 AMELXQ99217 191 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf88Q9BSF0 95 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 VCX2Q9H322 139 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 A0A087X002 238 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 Q6ZN92 141 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 XAGE1AQ9HD64 81 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 CDKN2A-AS1Q9UH64 79 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 LAMTOR2Q9Y2Q5 125 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 LPAP08519 4548 aa3.59□□□□□ -1.84
CDHR3-213ENST00000488386 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 M0QXV9 152 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 COX19Q49B96 90 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TOMM6Q96B49 74 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 PACRGQ96M98 296 aaPredicted RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 SCGB3A1Q96QR1 104 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 NXT2Q9NPJ8 142 aaKnown RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 RPS10P5Q9NQ39 176 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TRBV30A0A0K0K1B3 111 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 K7EMI3 77 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 SPINK8P0C7L1 97 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 CKS1BP61024 79 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 UBE2BP63146 152 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms