RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TMEM254Q8TBM7 123 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 C10orf82Q8WW14 230 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 CLEC2BQ92478 149 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 Q96M85 177 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 CIB3Q96Q77 187 aaPredicted RBP1.75□□□□□ -2.13
UBR3-211ENST00000487689 FKBP11Q9NYL4 201 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 LHFPL6Q9Y693 200 aa1.75□□□□□ -2.13
UBR3-211ENST00000487689 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 LOC285095A0A1B0GVY8 99 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 ZNF736B4DX44 427 aaPredicted RBP1.74□□□□□ -2.13
UBR3-211ENST00000487689 M0R2P5 195 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 HYPMO75409 117 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 IGLV6-57P01721 117 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 CRPP02741 224 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 CD3DP04234 171 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
UBR3-211ENST00000487689 C1orf134Q5TEV5 83 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 C8orf59Q8N0T1 100 aaPredicted RBP1.74□□□□□ -2.13
UBR3-211ENST00000487689 ACBD7Q8N6N7 88 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 ZFP30Q9Y2G7 519 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 LSM2Q9Y333 95 aaKnown RBP1.74□□□□□ -2.13
UBR3-211ENST00000487689 IER3IP1Q9Y5U9 82 aa1.74□□□□□ -2.13
UBR3-211ENST00000487689 IGKV2D-26A0A0A0MRZ7 120 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 TRAV1-1A0A0B4J248 108 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 LOC100130705A0A1B0GUX0 176 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 PVALEFA0A1B0GWK0 134 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 ZNF705FA8MVS1 300 aaPredicted RBP1.73□□□□□ -2.13
UBR3-211ENST00000487689 FNDC10F2Z333 226 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 CD14P08571 375 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 ZNF846Q147U1 533 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 SPRNQ5BIV9 151 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 C2orf82Q6UX34 121 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 ATP11AUNQ6ZP68 121 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 ARPINQ7Z6K5 226 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 OTOSQ8NHW6 89 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 NAA38Q9BRA0 125 aaKnown RBP1.73□□□□□ -2.13
UBR3-211ENST00000487689 CST11Q9H112 138 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 NAA60Q9H7X0 242 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
UBR3-211ENST00000487689 IGHV1-24A0A0C4DH33 117 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 IGKV2-24A0A0C4DH68 120 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 SNAPC5O75971 98 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 IFNA17P01571 189 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 ASAH2BP0C7U1 165 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 SSR2P43308 183 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 TPPP2P59282 170 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 TEX261Q6UWH6 196 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 Q6ZUT4 128 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 GTF2H5Q6ZYL4 71 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 C9orf163Q8N9P6 203 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 ATP6V0E2Q8NHE4 81 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 ZNF431Q8TF32 576 aaPredicted RBP1.72□□□□□ -2.13
UBR3-211ENST00000487689 C4orf3Q8WVX3 66 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 SMIM7Q9BQ49 75 aa1.72□□□□□ -2.13
UBR3-211ENST00000487689 TRAV10A0A0B4J240 114 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 TMEM218A2RU14 115 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 CCL22O00626 93 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 CD2P06729 351 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 HAMPP81172 84 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 ELOBQ15370 118 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 LINC00269Q8N2A0 174 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 SFT2D1Q8WV19 159 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 AGPAT4-IT1Q9H0P7 198 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 RPRMQ9NS64 109 aa1.71□□□□□ -2.14
UBR3-211ENST00000487689 TRAV30A0A087WSZ9 112 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 C3orf85A0A1B0GTC6 90 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 A6NN06 94 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 Q56UQ5 140 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 TMEM106BQ9NUM4 274 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 TAS2R8Q9NYW2 309 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 NOP16Q9Y3C1 178 aaKnown RBP1.7□□□□□ -2.14
UBR3-211ENST00000487689 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
UBR3-211ENST00000487689 IGLV3-32A0A0A0MS00 114 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 TRAV2A0A0B4J234 112 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 H3BSH0 61 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 CCDC179H3BU77 68 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 J3QLW9 94 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 APOC4-APOC2K7ER74 178 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 M0R129 80 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 M0R143 59 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 EDF1O60869 148 aaKnown RBP1.69□□□□□ -2.14
UBR3-211ENST00000487689 APOC2P02655 101 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 GNG2P59768 71 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 PKIAP61925 76 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 PRB3Q04118 309 aaPredicted RBP1.69□□□□□ -2.14
UBR3-211ENST00000487689 HSD52Q0P140 79 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 PDE6HQ13956 83 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 DEFB136Q30KP8 78 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 NCBP2-AS2Q69YL0 99 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 OR2T2Q6IF00 324 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 CASC2Q6XLA1 102 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 TVP23CQ96ET8 276 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 MRPL57Q9BQC6 102 aaKnown RBP1.69□□□□□ -2.14
UBR3-211ENST00000487689 TIMM21Q9BVV7 248 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 SEC11CQ9BY50 192 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 SERP1Q9Y6X1 66 aa1.69□□□□□ -2.14
UBR3-211ENST00000487689 LOC107984156A0A0G2JMH3 177 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms