RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SERF1AO75920 110 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 C2orf82Q6UX34 121 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 STPG4Q8N801 248 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
SF1-216ENST00000486867 PRSS2P07478 247 aa8.27□□□□□ -1.09
SF1-216ENST00000486867 INAFM2P0DMQ5 153 aa8.27□□□□□ -1.09
SF1-216ENST00000486867 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
SF1-216ENST00000486867 CXCL5P42830 114 aa8.27□□□□□ -1.09
SF1-216ENST00000486867 C6orf226Q5I0X4 101 aa8.26□□□□□ -1.09
SF1-216ENST00000486867 Q6ZRP5 223 aa8.26□□□□□ -1.09
SF1-216ENST00000486867 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
SF1-216ENST00000486867 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 F8VRH5 84 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 H3BRM9 83 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 NUPR1O60356 82 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 CKS1BP61024 79 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
SF1-216ENST00000486867 GAGE2BQ13066 116 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 TOMM7Q9P0U1 55 aa8.25□□□□□ -1.09
SF1-216ENST00000486867 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 NDUFA6P56556 154 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
SF1-216ENST00000486867 ODF1Q14990 250 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
SF1-216ENST00000486867 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
SF1-216ENST00000486867 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
SF1-216ENST00000486867 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
SF1-216ENST00000486867 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
SF1-216ENST00000486867 S100A1P23297 94 aa8.22□□□□□ -1.09
SF1-216ENST00000486867 C7orf33Q8WU49 177 aa8.22□□□□□ -1.09
SF1-216ENST00000486867 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.1
SF1-216ENST00000486867 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
SF1-216ENST00000486867 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
SF1-216ENST00000486867 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
SF1-216ENST00000486867 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
SF1-216ENST00000486867 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
SF1-216ENST00000486867 HNRNPA3P51991 378 aaKnown RBP8.19□□□□□ -1.1
SF1-216ENST00000486867 TMEM170BQ5T4T1 132 aa8.19□□□□□ -1.1
SF1-216ENST00000486867 ATP6V1G1O75348 118 aa8.18□□□□□ -1.1
SF1-216ENST00000486867 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SF1-216ENST00000486867 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
SF1-216ENST00000486867 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
SF1-216ENST00000486867 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
SF1-216ENST00000486867 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
SF1-216ENST00000486867 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
SF1-216ENST00000486867 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.1
SF1-216ENST00000486867 FABP4P15090 132 aa8.15□□□□□ -1.1
SF1-216ENST00000486867 PLNP26678 52 aa8.15□□□□□ -1.1
SF1-216ENST00000486867 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
SF1-216ENST00000486867 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
SF1-216ENST00000486867 COX17Q14061 63 aa8.14□□□□□ -1.11
SF1-216ENST00000486867 DPM2O94777 84 aa8.13□□□□□ -1.11
SF1-216ENST00000486867 FAM19A5Q7Z5A7 132 aaPredicted RBP8.13□□□□□ -1.11
SF1-216ENST00000486867 MAP1LC3CQ9BXW4 147 aa8.13□□□□□ -1.11
SF1-216ENST00000486867 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
SF1-216ENST00000486867 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
SF1-216ENST00000486867 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
SF1-216ENST00000486867 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 M0QXV9 152 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 OXTP01178 125 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
SF1-216ENST00000486867 SERTAD4-AS1Q5TG53 156 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
SF1-216ENST00000486867 H0Y8G0 127 aa8.11□□□□□ -1.11
SF1-216ENST00000486867 SYS1-DBNDD2H3BUS1 97 aa8.11□□□□□ -1.11
SF1-216ENST00000486867 IGKCP01834 107 aa8.1□□□□□ -1.11
SF1-216ENST00000486867 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
SF1-216ENST00000486867 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
SF1-216ENST00000486867 LEPROTO15243 131 aa8.09□□□□□ -1.11
SF1-216ENST00000486867 PFN2P35080 140 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 HERV-K104P63124 156 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 PET117Q6UWS5 81 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 PMCHL2Q9BQD1 86 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 SND1-IT1Q9HBX3 110 aa8.08□□□□□ -1.12
SF1-216ENST00000486867 C3orf79P0CE67 100 aa8.07□□□□□ -1.12
SF1-216ENST00000486867 LBHQ53QV2 105 aaPredicted RBP8.07□□□□□ -1.12
SF1-216ENST00000486867 NDUFA12Q9UI09 145 aa8.07□□□□□ -1.12
SF1-216ENST00000486867 J3QQQ9 107 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms