RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 C20orf202A1L168 122 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 IGKCP01834 107 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 SLPIP03973 132 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 CXCL5P42830 114 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 SNRPEP62304 92 aaKnown RBP7.38□□□□□ -1.23
NUP50-216ENST00000486184 PET117Q6UWS5 81 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 Q6ZRU5 148 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
NUP50-216ENST00000486184 HECTD4Q9Y4D8 3996 aa7.37□□□□□ -1.23
NUP50-216ENST00000486184 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
NUP50-216ENST00000486184 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
NUP50-216ENST00000486184 HERVK_113P61574 105 aa7.37□□□□□ -1.23
NUP50-216ENST00000486184 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
NUP50-216ENST00000486184 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
NUP50-216ENST00000486184 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
NUP50-216ENST00000486184 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
NUP50-216ENST00000486184 HIST1H2BLQ99880 126 aa7.36□□□□□ -1.23
NUP50-216ENST00000486184 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
NUP50-216ENST00000486184 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
NUP50-216ENST00000486184 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
NUP50-216ENST00000486184 AKR1D1P51857 326 aa7.35□□□□□ -1.23
NUP50-216ENST00000486184 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
NUP50-216ENST00000486184 LINC01545Q5VT33 79 aa7.35□□□□□ -1.23
NUP50-216ENST00000486184 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
NUP50-216ENST00000486184 IGLV5-39A0A0G2JS06 123 aa7.34□□□□□ -1.23
NUP50-216ENST00000486184 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
NUP50-216ENST00000486184 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
NUP50-216ENST00000486184 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
NUP50-216ENST00000486184 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
NUP50-216ENST00000486184 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
NUP50-216ENST00000486184 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
NUP50-216ENST00000486184 SDIM1Q6ZPB5 146 aa7.33□□□□□ -1.24
NUP50-216ENST00000486184 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
NUP50-216ENST00000486184 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
NUP50-216ENST00000486184 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
NUP50-216ENST00000486184 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
NUP50-216ENST00000486184 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
NUP50-216ENST00000486184 LEPROTO15243 131 aa7.31□□□□□ -1.24
NUP50-216ENST00000486184 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
NUP50-216ENST00000486184 MAJINQ3KP22 176 aa7.31□□□□□ -1.24
NUP50-216ENST00000486184 A0A096LNI7 61 aa7.3□□□□□ -1.24
NUP50-216ENST00000486184 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
NUP50-216ENST00000486184 LGALS3P17931 250 aaKnown RBP7.3□□□□□ -1.24
NUP50-216ENST00000486184 Q6ZSA8 131 aa7.3□□□□□ -1.24
NUP50-216ENST00000486184 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 GAGE2EQ4V326 116 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
NUP50-216ENST00000486184 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 GAGE2DQ9UEU5 116 aa7.29□□□□□ -1.24
NUP50-216ENST00000486184 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.29□□□□□ -1.24
NUP50-216ENST00000486184 MYMXA0A1B0GTQ4 84 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 J3QQQ9 107 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 SCGB1D1O95968 90 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 HERV-K104P63124 156 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 ATOH7Q8N100 152 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
NUP50-216ENST00000486184 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
NUP50-216ENST00000486184 PKHD1P08F94 4074 aa7.27□□□□□ -1.24
NUP50-216ENST00000486184 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 E9PLD3 99 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 PFN2P35080 140 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 NMUP48645 174 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 HAMPP81172 84 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 MEIG1Q5JSS6 88 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 Q6ZRP5 223 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 SCXQ7RTU7 201 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 STPG4Q8N801 248 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
NUP50-216ENST00000486184 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
NUP50-216ENST00000486184 LINC00587B1AMM8 73 aa7.26□□□□□ -1.25
NUP50-216ENST00000486184 CIRBPQ14011 172 aaKnown RBP7.26□□□□□ -1.25
NUP50-216ENST00000486184 COX17Q14061 63 aa7.26□□□□□ -1.25
NUP50-216ENST00000486184 A0A087WYN8 130 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 PANO1I0J062 215 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 XGP55808 180 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 LINC00158P58513 81 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
NUP50-216ENST00000486184 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
NUP50-216ENST00000486184 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
NUP50-216ENST00000486184 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
NUP50-216ENST00000486184 XAGE1AQ9HD64 81 aa7.23□□□□□ -1.25
NUP50-216ENST00000486184 ZNF815PA8K554 130 aa7.22□□□□□ -1.25
NUP50-216ENST00000486184 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
NUP50-216ENST00000486184 PLAC8Q9NZF1 115 aa7.22□□□□□ -1.25
NUP50-216ENST00000486184 IGKV2D-26A0A0A0MRZ7 120 aa7.21□□□□□ -1.26
NUP50-216ENST00000486184 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.26
NUP50-216ENST00000486184 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
NUP50-216ENST00000486184 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
NUP50-216ENST00000486184 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.26
NUP50-216ENST00000486184 C7orf33Q8WU49 177 aa7.21□□□□□ -1.26
NUP50-216ENST00000486184 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
NUP50-216ENST00000486184 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
NUP50-216ENST00000486184 FAM168BA1KXE4 195 aa7.19□□□□□ -1.26
NUP50-216ENST00000486184 JOSD1Q15040 202 aaPredicted RBP7.19□□□□□ -1.26
NUP50-216ENST00000486184 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
NUP50-216ENST00000486184 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 385.8 ms