RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
THUMPD3-209ENST00000484006 PACRGQ96M98 296 aaPredicted RBP3.5□□□□□ -1.85
THUMPD3-209ENST00000484006 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
THUMPD3-209ENST00000484006 IGLV5-45A0A087WSX0 123 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 IGIPA6NJ69 53 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 S100A2P29034 98 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 KRTDAPP60985 99 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 MRPS36P82909 103 aaKnown RBP3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 COX6A2Q02221 97 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 STPG4Q8N801 248 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 MAPKAPK5-AS1Q8N8E1 139 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 ORAOV1Q8WV07 137 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 TIMM17AQ99595 171 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 PMCHL2Q9BQD1 86 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 HSPB8Q9UJY1 196 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 CHTOPQ9Y3Y2 248 aaKnown RBP3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 PYGO1Q9Y3Y4 419 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
THUMPD3-209ENST00000484006 A0A096LNJ9 63 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 IGHV1-58A0A0C4DH39 117 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 LINC01549A6NIU2 74 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 APOMO95445 188 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 SPINK8P0C7L1 97 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 UBE2D1P51668 147 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 Q8N814 137 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 MAP1LC3CQ9BXW4 147 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
THUMPD3-209ENST00000484006 LRCOL1A6NCL2 159 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 LINC01546A6NGU7 62 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 H3BRM9 83 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 HERVK_113P63121 156 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 SEC11AP67812 179 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 HAMPP81172 84 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 AMELXQ99217 191 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 RYR3Q15413 4870 aa3.47□□□□□ -1.85
THUMPD3-209ENST00000484006 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 CKS1BP61024 79 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 KRTAP26-1Q6PEX3 210 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 MRPL35Q9NZE8 188 aaKnown RBP3.46□□□□□ -1.86
THUMPD3-209ENST00000484006 KMT2AQ03164 3969 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 TINCRA0A1B0GVN0 87 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 C11orf86A6NJI1 115 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 KRTAP16-1A8MUX0 517 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 GAGE2BQ13066 116 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 C2orf82Q6UX34 121 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 ATOH7Q8N100 152 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 CARD19Q96LW7 228 aa3.45□□□□□ -1.86
THUMPD3-209ENST00000484006 A0A087WZ39 114 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 C20orf202A1L168 122 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 F8VRH5 84 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 SYS1-DBNDD2H3BUS1 97 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 NDUFA1O15239 70 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 DPM2O94777 84 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 SCGB1D1O95968 90 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 IGKCP01834 107 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 C3orf79P0CE67 100 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 ZNF22P17026 224 aaPredicted RBP3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 DSCR10P59022 87 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 HERVK_113P61574 105 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 RPL24P83731 157 aaKnown RBP3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 UNQ6190/PRO20217Q6UXQ8 127 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 Q6ZRU5 148 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
THUMPD3-209ENST00000484006 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 TRAV12-1A0A0B4J245 112 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 CHTF8P0CG12 524 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 IGLC3P0DOY3 106 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 MAJINQ3KP22 176 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 HIST3H2BBQ8N257 126 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 OR10D4PQ8NGN7 298 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
THUMPD3-209ENST00000484006 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms