RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 DNAH9Q9NYC9 4486 aa-1.24□□□□□ -2.61
PMS1-219ENST00000483293 IGLC1P0CG04 106 aa-1.24□□□□□ -2.61
PMS1-219ENST00000483293 UBA52P62987 128 aaKnown RBP-1.24□□□□□ -2.61
PMS1-219ENST00000483293 FDCSPQ8NFU4 85 aa-1.24□□□□□ -2.61
PMS1-219ENST00000483293 LYSTQ99698 3801 aa-1.24□□□□□ -2.61
PMS1-219ENST00000483293 NXT2Q9NPJ8 142 aaKnown RBP-1.24□□□□□ -2.61
PMS1-219ENST00000483293 PLECQ15149 4684 aaKnown RBP-1.25□□□□□ -2.61
PMS1-219ENST00000483293 ZZEF1O43149 2961 aa-1.25□□□□□ -2.61
PMS1-219ENST00000483293 OOSP1A8MZH6 123 aa-1.25□□□□□ -2.61
PMS1-219ENST00000483293 FGF7P21781 194 aa-1.25□□□□□ -2.61
PMS1-219ENST00000483293 C10orf113Q5VZT2 155 aa-1.25□□□□□ -2.61
PMS1-219ENST00000483293 QRICH2Q9H0J4 1663 aa-1.26□□□□□ -2.61
PMS1-219ENST00000483293 MT1AP04731 61 aa-1.26□□□□□ -2.61
PMS1-219ENST00000483293 AKAIN1P0CW23 69 aa-1.26□□□□□ -2.61
PMS1-219ENST00000483293 FAM223AQ8IWN6 122 aa-1.26□□□□□ -2.61
PMS1-219ENST00000483293 TMEM263Q8WUH6 116 aaKnown RBP-1.26□□□□□ -2.61
PMS1-219ENST00000483293 UQCR10Q9UDW1 63 aa-1.26□□□□□ -2.61
PMS1-219ENST00000483293 APOBP04114 4563 aaKnown RBP-1.26□□□□□ -2.61
PMS1-219ENST00000483293 ARL2-SNX15V9GYD0 113 aa-1.27□□□□□ -2.61
PMS1-219ENST00000483293 NBEAQ8NFP9 2946 aa-1.27□□□□□ -2.61
PMS1-219ENST00000483293 KTN1Q86UP2 1357 aaKnown RBP-1.28□□□□□ -2.61
PMS1-219ENST00000483293 TRBV7-4A0A0J9YYF1 115 aa-1.28□□□□□ -2.61
PMS1-219ENST00000483293 M0R2T5 61 aa-1.28□□□□□ -2.61
PMS1-219ENST00000483293 SPINK4O60575 86 aa-1.28□□□□□ -2.61
PMS1-219ENST00000483293 UTP20O75691 2785 aaKnown RBP-1.29□□□□□ -2.62
PMS1-219ENST00000483293 IQSEC2Q5JU85 1478 aa-1.29□□□□□ -2.62
PMS1-219ENST00000483293 C9orf153Q5TBE3 101 aa-1.29□□□□□ -2.62
PMS1-219ENST00000483293 DEFB105AQ8NG35 78 aa-1.29□□□□□ -2.62
PMS1-219ENST00000483293 DYNC1H1Q14204 4646 aaKnown RBP-1.29□□□□□ -2.62
PMS1-219ENST00000483293 SACSQ9NZJ4 4579 aa-1.29□□□□□ -2.62
PMS1-219ENST00000483293 ITPR1Q14643 2758 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 SPG11Q96JI7 2443 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 RELNP78509 3460 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 K7EP13 123 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 S100A12P80511 92 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 CMYA5Q8N3K9 4069 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 CUL7Q14999 1698 aa-1.3□□□□□ -2.62
PMS1-219ENST00000483293 LINC00959A0A1B0GUT2 108 aa-1.31□□□□□ -2.62
PMS1-219ENST00000483293 CDC42SE2Q9NRR3 84 aa-1.31□□□□□ -2.62
PMS1-219ENST00000483293 DNAH11Q96DT5 4516 aa-1.31□□□□□ -2.62
PMS1-219ENST00000483293 TULP4Q9NRJ4 1543 aa-1.31□□□□□ -2.62
PMS1-219ENST00000483293 CHD7Q9P2D1 2997 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 TET3O43151 1660 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SCN7AQ01118 1682 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SYS1-DBNDD2H3BUS1 97 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SNAPC5O75971 98 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 GNG11P61952 73 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SFTA2Q6UW10 78 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 LINC01600Q96MT4 127 aa-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SMG6Q86US8 1419 aaKnown RBP-1.32□□□□□ -2.62
PMS1-219ENST00000483293 SPRR4Q96PI1 79 aa-1.33□□□□□ -2.62
PMS1-219ENST00000483293 MAGI1Q96QZ7 1491 aaPredicted RBP-1.33□□□□□ -2.62
PMS1-219ENST00000483293 ABCA13Q86UQ4 5058 aa-1.33□□□□□ -2.62
PMS1-219ENST00000483293 TRIOO75962 3097 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 MTORP42345 2549 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 UBE2L5PA0A1B0GUS4 154 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 UBE2L3P68036 154 aaKnown RBP-1.34□□□□□ -2.62
PMS1-219ENST00000483293 PP6455Q8WZ26 134 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 MANBALQ9NQG1 85 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 DNAH1Q9P2D7 4330 aa-1.34□□□□□ -2.62
PMS1-219ENST00000483293 ROCK2O75116 1388 aaKnown RBP-1.34□□□□□ -2.62
PMS1-219ENST00000483293 C5orf42Q9H799 3197 aa-1.35□□□□□ -2.62
PMS1-219ENST00000483293 A2ML1A8K2U0 1454 aa-1.35□□□□□ -2.63
PMS1-219ENST00000483293 KIAA0556O60303 1618 aa-1.35□□□□□ -2.63
PMS1-219ENST00000483293 WHAMMP3Q1A5X7 153 aa-1.35□□□□□ -2.63
PMS1-219ENST00000483293 HMGXB3Q12766 1538 aa-1.35□□□□□ -2.63
PMS1-219ENST00000483293 FRYQ5TBA9 3013 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 GCN1Q92616 2671 aaKnown RBP-1.36□□□□□ -2.63
PMS1-219ENST00000483293 MT1HP80294 61 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 LCN9Q8WX39 176 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 CEP295Q9C0D2 2601 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 MGAM2Q2M2H8 2515 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 NBASA2RRP1 2371 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 COL6A5A8TX70 2615 aa-1.36□□□□□ -2.63
PMS1-219ENST00000483293 CSMD1Q96PZ7 3565 aa-1.37□□□□□ -2.63
PMS1-219ENST00000483293 SRCAPQ6ZRS2 3230 aa-1.37□□□□□ -2.63
PMS1-219ENST00000483293 LRRK2Q5S007 2527 aa-1.37□□□□□ -2.63
PMS1-219ENST00000483293 DEFB112Q30KQ8 113 aa-1.37□□□□□ -2.63
PMS1-219ENST00000483293 RIF1Q5UIP0 2472 aaKnown RBP-1.38□□□□□ -2.63
PMS1-219ENST00000483293 EHBP1L1Q8N3D4 1523 aa-1.38□□□□□ -2.63
PMS1-219ENST00000483293 HMGN1P05114 100 aa-1.38□□□□□ -2.63
PMS1-219ENST00000483293 C1orf54Q8WWF1 131 aa-1.38□□□□□ -2.63
PMS1-219ENST00000483293 FMN2Q9NZ56 1722 aa-1.38□□□□□ -2.63
PMS1-219ENST00000483293 REV3LO60673 3130 aa-1.38□□□□□ -2.63
PMS1-219ENST00000483293 EYSQ5T1H1 3165 aa-1.39□□□□□ -2.63
PMS1-219ENST00000483293 NBEAL2Q6ZNJ1 2754 aa-1.39□□□□□ -2.63
PMS1-219ENST00000483293 Q0VG73 95 aa-1.4□□□□□ -2.63
PMS1-219ENST00000483293 DEFB135Q30KP9 77 aa-1.4□□□□□ -2.63
PMS1-219ENST00000483293 PRO1933Q9H354 126 aa-1.4□□□□□ -2.63
PMS1-219ENST00000483293 DPH3P1Q9H4G8 78 aa-1.4□□□□□ -2.63
PMS1-219ENST00000483293 SETBP1Q9Y6X0 1596 aa-1.41□□□□□ -2.63
PMS1-219ENST00000483293 DNAH7Q8WXX0 4024 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 FAM24AA6NFZ4 105 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 TRAPPC2P0DI81 140 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 TRAPPC2BP0DI82 140 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 FAM167A-AS1Q96KT0 104 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 TOP2BQ02880 1626 aa-1.41□□□□□ -2.64
PMS1-219ENST00000483293 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.41□□□□□ -2.64
PMS1-219ENST00000483293 TRANK1O15050 2925 aa-1.42□□□□□ -2.64
PMS1-219ENST00000483293 C1orf167Q5SNV9 1468 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms