RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 GCSHP23434 173 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 CKS1BP61024 79 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 COX17Q14061 63 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 STPG4Q8N801 248 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 KMT2AQ03164 3969 aa5.43□□□□□ -1.54
SYNE1-225ENST00000481502 RTL8CO15255 209 aa5.42□□□□□ -1.54
SYNE1-225ENST00000481502 CDPF1Q6NVV7 123 aa5.42□□□□□ -1.54
SYNE1-225ENST00000481502 ATOH7Q8N100 152 aa5.42□□□□□ -1.54
SYNE1-225ENST00000481502 Q8N814 137 aa5.42□□□□□ -1.54
SYNE1-225ENST00000481502 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
SYNE1-225ENST00000481502 hDV102S1A0JD36 115 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 TIMM17BO60830 172 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 COX8AP10176 69 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 SYCNQ0VAF6 134 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 SPATA45Q537H7 98 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 Q6ZVH6 145 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 CAMK2N2Q96S95 79 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 TOMM7Q9P0U1 55 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
SYNE1-225ENST00000481502 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.54
SYNE1-225ENST00000481502 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
SYNE1-225ENST00000481502 CIRBPQ14011 172 aaKnown RBP5.4□□□□□ -1.54
SYNE1-225ENST00000481502 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
SYNE1-225ENST00000481502 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 SLC25A34Q6PIV7 304 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 LINC00518Q8N0U6 118 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 COPS9Q8WXC6 57 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 PAM16Q9Y3D7 125 aa5.39□□□□□ -1.55
SYNE1-225ENST00000481502 ZNF815PA8K554 130 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 MAJINQ3KP22 176 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 HIGD2BQ4VC39 106 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 CARD19Q96LW7 228 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 C12orf57Q99622 126 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 HIGD1BQ9P298 99 aa5.38□□□□□ -1.55
SYNE1-225ENST00000481502 LOC107984156A0A0G2JMH3 177 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 TMEM238C9JI98 176 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 TSPEAR-AS2P59090 65 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 WFDC2Q14508 124 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 Q6ZRU5 148 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 ARL17AQ8IVW1 177 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
SYNE1-225ENST00000481502 LOC107984640A0A0U1RRK4 108 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 TSTD3H0UI37 97 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 SLPIP03973 132 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 IFITM1P13164 125 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
SYNE1-225ENST00000481502 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
SYNE1-225ENST00000481502 LECT2O14960 151 aa5.35□□□□□ -1.55
SYNE1-225ENST00000481502 TAL2Q16559 108 aa5.35□□□□□ -1.55
SYNE1-225ENST00000481502 MEIG1Q5JSS6 88 aa5.35□□□□□ -1.55
SYNE1-225ENST00000481502 MIEN1Q9BRT3 115 aa5.35□□□□□ -1.55
SYNE1-225ENST00000481502 IGLV5-52A0A0A0MRZ9 124 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 C16orf90A8MZG2 172 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 C14orf144Q96I85 54 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 TP73-AS1Q9UF72 201 aa5.34□□□□□ -1.55
SYNE1-225ENST00000481502 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.55
SYNE1-225ENST00000481502 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.56
SYNE1-225ENST00000481502 A0A1B0GVY2 172 aa5.33□□□□□ -1.56
SYNE1-225ENST00000481502 LINC00526Q96FQ7 95 aa5.33□□□□□ -1.56
SYNE1-225ENST00000481502 LITAFQ99732 161 aa5.33□□□□□ -1.56
SYNE1-225ENST00000481502 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.32□□□□□ -1.56
SYNE1-225ENST00000481502 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
SYNE1-225ENST00000481502 LINC00158P58513 81 aa5.32□□□□□ -1.56
SYNE1-225ENST00000481502 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
SYNE1-225ENST00000481502 PLA2G2DQ9UNK4 145 aa5.32□□□□□ -1.56
SYNE1-225ENST00000481502 NDUFC2O95298 119 aa5.31□□□□□ -1.56
SYNE1-225ENST00000481502 PFN2P35080 140 aa5.31□□□□□ -1.56
SYNE1-225ENST00000481502 RPL24P83731 157 aaKnown RBP5.31□□□□□ -1.56
SYNE1-225ENST00000481502 SRSF9Q13242 221 aaKnown RBP eCLIP5.31□□□□□ -1.56
SYNE1-225ENST00000481502 Q6ZRP5 223 aa5.31□□□□□ -1.56
SYNE1-225ENST00000481502 MIR7-3HGQ8N6C7 128 aa5.31□□□□□ -1.56
SYNE1-225ENST00000481502 RYR2Q92736 4967 aa5.31□□□□□ -1.56
SYNE1-225ENST00000481502 EPM2AB3EWF7 344 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 FAM229AH3BQW9 127 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
SYNE1-225ENST00000481502 ADAMTSL4-AS1Q5T5F5 129 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 C2orf91Q6ZV80 131 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 SND1-IT1Q9HBX3 110 aa5.3□□□□□ -1.56
SYNE1-225ENST00000481502 DNAH2Q9P225 4427 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms