RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 J3QQQ9 107 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 NMUP48645 174 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 RNF151Q2KHN1 245 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 ANKRD39Q53RE8 183 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
TRAPPC12-218ENST00000479897 PKD1P98161 4303 aa8.15□□□□□ -1.11
TRAPPC12-218ENST00000479897 HSBP1L1C9JCN9 74 aa8.14□□□□□ -1.11
TRAPPC12-218ENST00000479897 CKS1BP61024 79 aa8.14□□□□□ -1.11
TRAPPC12-218ENST00000479897 Q6ZRU5 148 aa8.14□□□□□ -1.11
TRAPPC12-218ENST00000479897 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 C10orf25Q5T742 122 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
TRAPPC12-218ENST00000479897 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 SMIM6P0DI80 62 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 LGALS3P17931 250 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 MAJINQ3KP22 176 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
TRAPPC12-218ENST00000479897 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
TRAPPC12-218ENST00000479897 HERV-K104P63124 156 aa8.11□□□□□ -1.11
TRAPPC12-218ENST00000479897 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
TRAPPC12-218ENST00000479897 DNAH5Q8TE73 4624 aa8.1□□□□□ -1.11
TRAPPC12-218ENST00000479897 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
TRAPPC12-218ENST00000479897 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
TRAPPC12-218ENST00000479897 COX17Q14061 63 aa8.08□□□□□ -1.12
TRAPPC12-218ENST00000479897 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
TRAPPC12-218ENST00000479897 PAM16Q9Y3D7 125 aa8.08□□□□□ -1.12
TRAPPC12-218ENST00000479897 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 ZNF815PA8K554 130 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 LINC00587B1AMM8 73 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 PCP2Q8IVA1 136 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
TRAPPC12-218ENST00000479897 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
TRAPPC12-218ENST00000479897 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
TRAPPC12-218ENST00000479897 GCSHP23434 173 aa8.06□□□□□ -1.12
TRAPPC12-218ENST00000479897 C9orf116Q5BN46 136 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-218ENST00000479897 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
TRAPPC12-218ENST00000479897 DLEU1O43261 78 aa8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 TIMM17BO60830 172 aa8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 COX8AP10176 69 aa8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 FUSP35637 526 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 S100A12P80511 92 aa8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
TRAPPC12-218ENST00000479897 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
TRAPPC12-218ENST00000479897 CIRBPQ14011 172 aaKnown RBP8.04□□□□□ -1.12
TRAPPC12-218ENST00000479897 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
TRAPPC12-218ENST00000479897 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
TRAPPC12-218ENST00000479897 Q6ZRP5 223 aa8.04□□□□□ -1.12
TRAPPC12-218ENST00000479897 A0A096LNI7 61 aa8.03□□□□□ -1.12
TRAPPC12-218ENST00000479897 PTTG1IPP53801 180 aa8.03□□□□□ -1.12
TRAPPC12-218ENST00000479897 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
TRAPPC12-218ENST00000479897 Q6ZSA8 131 aa8.03□□□□□ -1.12
TRAPPC12-218ENST00000479897 LITAFQ99732 161 aa8.03□□□□□ -1.12
TRAPPC12-218ENST00000479897 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
TRAPPC12-218ENST00000479897 PFN2P35080 140 aa8.02□□□□□ -1.13
TRAPPC12-218ENST00000479897 LINC00474Q9P2X8 69 aa8.02□□□□□ -1.13
TRAPPC12-218ENST00000479897 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
TRAPPC12-218ENST00000479897 KRTAP10-1P60331 282 aa8.01□□□□□ -1.13
TRAPPC12-218ENST00000479897 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
TRAPPC12-218ENST00000479897 SCGB1D4Q6XE38 83 aa8.01□□□□□ -1.13
TRAPPC12-218ENST00000479897 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
TRAPPC12-218ENST00000479897 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
TRAPPC12-218ENST00000479897 LINC00158P58513 81 aa8□□□□□ -1.13
TRAPPC12-218ENST00000479897 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
TRAPPC12-218ENST00000479897 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
TRAPPC12-218ENST00000479897 C14orf144Q96I85 54 aa8□□□□□ -1.13
TRAPPC12-218ENST00000479897 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 Q6ZVH6 145 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 C12orf57Q99622 126 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 PPDPFQ9H3Y8 114 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 SPANXCQ9NY87 97 aa7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC12-218ENST00000479897 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 EPM2AB3EWF7 344 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 ADAMTSL4-AS1Q5T5F5 129 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 SND1-IT1Q9HBX3 110 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 SPANXB1Q9NS25 103 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 HIGD1BQ9P298 99 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
TRAPPC12-218ENST00000479897 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
TRAPPC12-218ENST00000479897 PANO1I0J062 215 aa7.97□□□□□ -1.13
TRAPPC12-218ENST00000479897 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms