RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ZC2HC1BQ5TFG8 222 aa9.19□□□□□ -0.94
ATG4B-218ENST00000479554 STPG4Q8N801 248 aa9.19□□□□□ -0.94
ATG4B-218ENST00000479554 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
ATG4B-218ENST00000479554 GAGE12HA6NDE8 117 aa9.18□□□□□ -0.94
ATG4B-218ENST00000479554 C14orf144Q96I85 54 aa9.18□□□□□ -0.94
ATG4B-218ENST00000479554 C2orf88Q9BSF0 95 aa9.18□□□□□ -0.94
ATG4B-218ENST00000479554 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 OXTP01178 125 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 COX8AP10176 69 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 SLC25A34Q6PIV7 304 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 Q6ZUT4 128 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 OR5A1Q8NGJ0 315 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 FAM104AQ969W3 186 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
ATG4B-218ENST00000479554 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
ATG4B-218ENST00000479554 ZNF25P17030 456 aaPredicted RBP9.16□□□□□ -0.94
ATG4B-218ENST00000479554 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
ATG4B-218ENST00000479554 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
ATG4B-218ENST00000479554 SLPIP03973 132 aa9.15□□□□□ -0.94
ATG4B-218ENST00000479554 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
ATG4B-218ENST00000479554 CHCHD10Q8WYQ3 142 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-218ENST00000479554 DLEU1O43261 78 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 NMUP48645 174 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 HERVK_113P61574 105 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 DPH3Q96FX2 82 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 CDC42SE2Q9NRR3 84 aa9.14□□□□□ -0.95
ATG4B-218ENST00000479554 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
ATG4B-218ENST00000479554 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
ATG4B-218ENST00000479554 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
ATG4B-218ENST00000479554 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
ATG4B-218ENST00000479554 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
ATG4B-218ENST00000479554 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
ATG4B-218ENST00000479554 A0A087WYN8 130 aa9.12□□□□□ -0.95
ATG4B-218ENST00000479554 E9PLD3 99 aa9.12□□□□□ -0.95
ATG4B-218ENST00000479554 UBE2D1P51668 147 aa9.12□□□□□ -0.95
ATG4B-218ENST00000479554 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
ATG4B-218ENST00000479554 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
ATG4B-218ENST00000479554 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
ATG4B-218ENST00000479554 SEC11AP67812 179 aa9.11□□□□□ -0.95
ATG4B-218ENST00000479554 FOXI1Q12951 378 aa9.11□□□□□ -0.95
ATG4B-218ENST00000479554 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
ATG4B-218ENST00000479554 FAM19A3Q7Z5A8 133 aa9.11□□□□□ -0.95
ATG4B-218ENST00000479554 GVQW2A0A096LPI5 108 aaPredicted RBP9.1□□□□□ -0.95
ATG4B-218ENST00000479554 XCL1P47992 114 aa9.1□□□□□ -0.95
ATG4B-218ENST00000479554 COX6A2Q02221 97 aa9.1□□□□□ -0.95
ATG4B-218ENST00000479554 PCP2Q8IVA1 136 aa9.1□□□□□ -0.95
ATG4B-218ENST00000479554 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
ATG4B-218ENST00000479554 LINC00959A0A1B0GUT2 108 aa9.09□□□□□ -0.95
ATG4B-218ENST00000479554 TMEM223A0PJW6 202 aa9.09□□□□□ -0.95
ATG4B-218ENST00000479554 CCL25O15444 150 aa9.09□□□□□ -0.95
ATG4B-218ENST00000479554 HERVK_113P63121 156 aa9.09□□□□□ -0.95
ATG4B-218ENST00000479554 CTAG1AP78358 180 aa9.09□□□□□ -0.95
ATG4B-218ENST00000479554 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
ATG4B-218ENST00000479554 IGLV5-45A0A087WSX0 123 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 H3BRM9 83 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 M0R143 59 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 SS18Q15532 418 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 LINC00469Q8N7U9 141 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 TP73-AS1Q9UF72 201 aa9.07□□□□□ -0.96
ATG4B-218ENST00000479554 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
ATG4B-218ENST00000479554 LEPROTO15243 131 aa9.06□□□□□ -0.96
ATG4B-218ENST00000479554 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
ATG4B-218ENST00000479554 C2orf91Q6ZV80 131 aa9.06□□□□□ -0.96
ATG4B-218ENST00000479554 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
ATG4B-218ENST00000479554 Q6ZRU5 148 aa9.05□□□□□ -0.96
ATG4B-218ENST00000479554 TTTY13Q9BZ97 58 aa9.05□□□□□ -0.96
ATG4B-218ENST00000479554 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
ATG4B-218ENST00000479554 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
ATG4B-218ENST00000479554 A0A096LNI7 61 aa9.04□□□□□ -0.96
ATG4B-218ENST00000479554 J3QQQ9 107 aa9.04□□□□□ -0.96
ATG4B-218ENST00000479554 LGALS3P17931 250 aaKnown RBP9.04□□□□□ -0.96
ATG4B-218ENST00000479554 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
ATG4B-218ENST00000479554 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
ATG4B-218ENST00000479554 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
ATG4B-218ENST00000479554 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
ATG4B-218ENST00000479554 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
ATG4B-218ENST00000479554 SNHG12Q9BXW3 62 aa9.03□□□□□ -0.96
ATG4B-218ENST00000479554 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
ATG4B-218ENST00000479554 SPINK8P0C7L1 97 aa9.02□□□□□ -0.97
ATG4B-218ENST00000479554 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
ATG4B-218ENST00000479554 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
ATG4B-218ENST00000479554 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
ATG4B-218ENST00000479554 TSPEAR-AS2P59090 65 aa9.01□□□□□ -0.97
ATG4B-218ENST00000479554 HSD52Q0P140 79 aa9.01□□□□□ -0.97
ATG4B-218ENST00000479554 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
ATG4B-218ENST00000479554 COX7A2LO14548 114 aa9□□□□□ -0.97
ATG4B-218ENST00000479554 MT1HL1P0DM35 61 aa9□□□□□ -0.97
ATG4B-218ENST00000479554 MALP21145 153 aa9□□□□□ -0.97
ATG4B-218ENST00000479554 HINT1P49773 126 aaPredicted RBP9□□□□□ -0.97
ATG4B-218ENST00000479554 BATFQ16520 125 aa9□□□□□ -0.97
ATG4B-218ENST00000479554 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
ATG4B-218ENST00000479554 PRR3P79522 188 aaKnown RBP8.99□□□□□ -0.97
ATG4B-218ENST00000479554 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms