RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 HSPG2P98160 4391 aa9.27□□□□□ -0.93
CCNL1-217ENST00000476367 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
CCNL1-217ENST00000476367 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
CCNL1-217ENST00000476367 XGP55808 180 aa9.26□□□□□ -0.93
CCNL1-217ENST00000476367 KRTDAPP60985 99 aa9.26□□□□□ -0.93
CCNL1-217ENST00000476367 S100A12P80511 92 aa9.26□□□□□ -0.93
CCNL1-217ENST00000476367 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 TMEM170BQ5T4T1 132 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 Q6ZSA8 131 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
CCNL1-217ENST00000476367 SYCNQ0VAF6 134 aa9.24□□□□□ -0.93
CCNL1-217ENST00000476367 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
CCNL1-217ENST00000476367 Q6ZRU5 148 aa9.24□□□□□ -0.93
CCNL1-217ENST00000476367 DPM2O94777 84 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 Q8IZM0 81 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 IGKCP01834 107 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 PLNP26678 52 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 SDIM1Q6ZPB5 146 aa9.23□□□□□ -0.93
CCNL1-217ENST00000476367 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
CCNL1-217ENST00000476367 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
CCNL1-217ENST00000476367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
CCNL1-217ENST00000476367 H3BRM9 83 aa9.21□□□□□ -0.93
CCNL1-217ENST00000476367 PANO1I0J062 215 aa9.21□□□□□ -0.93
CCNL1-217ENST00000476367 CHTF8P0CG12 524 aa9.21□□□□□ -0.93
CCNL1-217ENST00000476367 SCXQ7RTU7 201 aa9.21□□□□□ -0.93
CCNL1-217ENST00000476367 TSPEAR-AS2P59090 65 aa9.2□□□□□ -0.94
CCNL1-217ENST00000476367 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
CCNL1-217ENST00000476367 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
CCNL1-217ENST00000476367 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
CCNL1-217ENST00000476367 NDUFA1O15239 70 aa9.2□□□□□ -0.94
CCNL1-217ENST00000476367 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
CCNL1-217ENST00000476367 PRSS2P07478 247 aa9.19□□□□□ -0.94
CCNL1-217ENST00000476367 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-217ENST00000476367 A0A096LNI7 61 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 STPG4Q8N801 248 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
CCNL1-217ENST00000476367 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
CCNL1-217ENST00000476367 PCP4L1A6NKN8 68 aa9.17□□□□□ -0.94
CCNL1-217ENST00000476367 F8WDY8 70 aa9.17□□□□□ -0.94
CCNL1-217ENST00000476367 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
CCNL1-217ENST00000476367 DPH3Q96FX2 82 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 LOC107984640A0A0U1RRK4 108 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 CKS1BP61024 79 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 MAJINQ3KP22 176 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 Q8N1X5 172 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 SPACA4Q8TDM5 124 aa9.16□□□□□ -0.94
CCNL1-217ENST00000476367 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
CCNL1-217ENST00000476367 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
CCNL1-217ENST00000476367 FAT1Q14517 4588 aa9.14□□□□□ -0.95
CCNL1-217ENST00000476367 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
CCNL1-217ENST00000476367 E9PLD3 99 aa9.14□□□□□ -0.95
CCNL1-217ENST00000476367 LEPROTO15243 131 aa9.14□□□□□ -0.95
CCNL1-217ENST00000476367 Q6ZRP5 223 aa9.14□□□□□ -0.95
CCNL1-217ENST00000476367 A0A087WYN8 130 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 CXCL5P42830 114 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 ANKRD39Q53RE8 183 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 Q5VSD8 79 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 KRTAP4-5Q9BYR2 181 aa9.13□□□□□ -0.95
CCNL1-217ENST00000476367 C20orf202A1L168 122 aa9.12□□□□□ -0.95
CCNL1-217ENST00000476367 J3QQQ9 107 aa9.12□□□□□ -0.95
CCNL1-217ENST00000476367 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
CCNL1-217ENST00000476367 TTTY13Q9BZ97 58 aa9.12□□□□□ -0.95
CCNL1-217ENST00000476367 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
CCNL1-217ENST00000476367 LINC00474Q9P2X8 69 aa9.11□□□□□ -0.95
CCNL1-217ENST00000476367 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
CCNL1-217ENST00000476367 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
CCNL1-217ENST00000476367 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 TSTD3H0UI37 97 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 HERVK_113P61574 105 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
CCNL1-217ENST00000476367 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
CCNL1-217ENST00000476367 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
CCNL1-217ENST00000476367 C9orf129Q5T035 196 aaKnown RBP9.08□□□□□ -0.96
CCNL1-217ENST00000476367 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
CCNL1-217ENST00000476367 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
CCNL1-217ENST00000476367 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
CCNL1-217ENST00000476367 PCP2Q8IVA1 136 aa9.06□□□□□ -0.96
CCNL1-217ENST00000476367 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
CCNL1-217ENST00000476367 PFN2P35080 140 aa9.05□□□□□ -0.96
CCNL1-217ENST00000476367 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
CCNL1-217ENST00000476367 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
CCNL1-217ENST00000476367 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms