RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 H3BRM9 83 aa9.15□□□□□ -0.94
ABCF3-211ENST00000475728 HSBP1O75506 76 aa9.15□□□□□ -0.94
ABCF3-211ENST00000475728 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.94
ABCF3-211ENST00000475728 RPL18AQ02543 176 aaKnown RBP9.15□□□□□ -0.94
ABCF3-211ENST00000475728 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
ABCF3-211ENST00000475728 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
ABCF3-211ENST00000475728 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
ABCF3-211ENST00000475728 CXCL5P42830 114 aa9.14□□□□□ -0.95
ABCF3-211ENST00000475728 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
ABCF3-211ENST00000475728 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
ABCF3-211ENST00000475728 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
ABCF3-211ENST00000475728 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
ABCF3-211ENST00000475728 C2orf82Q6UX34 121 aa9.12□□□□□ -0.95
ABCF3-211ENST00000475728 F8VRH5 84 aa9.11□□□□□ -0.95
ABCF3-211ENST00000475728 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
ABCF3-211ENST00000475728 MYCBP2O75592 4640 aa9.11□□□□□ -0.95
ABCF3-211ENST00000475728 NDUFC2-KCTD14E9PQ53 114 aa9.1□□□□□ -0.95
ABCF3-211ENST00000475728 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
ABCF3-211ENST00000475728 TRAV12-1A0A0B4J245 112 aa9.09□□□□□ -0.95
ABCF3-211ENST00000475728 SERF1AO75920 110 aa9.08□□□□□ -0.96
ABCF3-211ENST00000475728 SPINK8P0C7L1 97 aa9.08□□□□□ -0.96
ABCF3-211ENST00000475728 KRTAP10-4P60372 401 aaPredicted RBP9.08□□□□□ -0.96
ABCF3-211ENST00000475728 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
ABCF3-211ENST00000475728 Q6ZRP5 223 aa9.08□□□□□ -0.96
ABCF3-211ENST00000475728 CHTOPQ9Y3Y2 248 aaKnown RBP9.08□□□□□ -0.96
ABCF3-211ENST00000475728 SCO1O75880 301 aa9.07□□□□□ -0.96
ABCF3-211ENST00000475728 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
ABCF3-211ENST00000475728 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
ABCF3-211ENST00000475728 FAM19A2Q8N3H0 131 aa9.07□□□□□ -0.96
ABCF3-211ENST00000475728 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
ABCF3-211ENST00000475728 LEPROTL1O95214 131 aa9.06□□□□□ -0.96
ABCF3-211ENST00000475728 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
ABCF3-211ENST00000475728 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
ABCF3-211ENST00000475728 IGLV5-39A0A0G2JS06 123 aa9.05□□□□□ -0.96
ABCF3-211ENST00000475728 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
ABCF3-211ENST00000475728 C11orf86A6NJI1 115 aa9.05□□□□□ -0.96
ABCF3-211ENST00000475728 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
ABCF3-211ENST00000475728 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
ABCF3-211ENST00000475728 LINC00310P59036 64 aa9.03□□□□□ -0.96
ABCF3-211ENST00000475728 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
ABCF3-211ENST00000475728 S100A1P23297 94 aa9.01□□□□□ -0.97
ABCF3-211ENST00000475728 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
ABCF3-211ENST00000475728 H0Y8G0 127 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BKO60814 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BJP06899 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 FABP4P15090 132 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BOP23527 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BBP33778 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BDP58876 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BCP62807 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
ABCF3-211ENST00000475728 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
ABCF3-211ENST00000475728 M0QXV9 152 aa8.99□□□□□ -0.97
ABCF3-211ENST00000475728 NUPR1O60356 82 aa8.99□□□□□ -0.97
ABCF3-211ENST00000475728 PLNP26678 52 aa8.99□□□□□ -0.97
ABCF3-211ENST00000475728 ODF1Q14990 250 aa8.99□□□□□ -0.97
ABCF3-211ENST00000475728 C9orf129Q5T035 196 aaKnown RBP8.99□□□□□ -0.97
ABCF3-211ENST00000475728 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
ABCF3-211ENST00000475728 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
ABCF3-211ENST00000475728 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
ABCF3-211ENST00000475728 J3QL48 77 aa8.98□□□□□ -0.97
ABCF3-211ENST00000475728 OXTP01178 125 aa8.98□□□□□ -0.97
ABCF3-211ENST00000475728 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
ABCF3-211ENST00000475728 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
ABCF3-211ENST00000475728 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
ABCF3-211ENST00000475728 COX17Q14061 63 aa8.97□□□□□ -0.97
ABCF3-211ENST00000475728 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
ABCF3-211ENST00000475728 DPM2O94777 84 aa8.96□□□□□ -0.98
ABCF3-211ENST00000475728 UBE2BP63146 152 aa8.96□□□□□ -0.98
ABCF3-211ENST00000475728 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
ABCF3-211ENST00000475728 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
ABCF3-211ENST00000475728 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
ABCF3-211ENST00000475728 HMCN2Q8NDA2 5059 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 PFN2P35080 140 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 HERVK_113P61574 105 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
ABCF3-211ENST00000475728 PLA2G2DQ9UNK4 145 aa8.94□□□□□ -0.98
ABCF3-211ENST00000475728 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
ABCF3-211ENST00000475728 HERV-K104P63124 156 aa8.93□□□□□ -0.98
ABCF3-211ENST00000475728 C1orf137Q5JT78 98 aa8.93□□□□□ -0.98
ABCF3-211ENST00000475728 COA6Q5JTJ3 125 aaKnown RBP8.93□□□□□ -0.98
ABCF3-211ENST00000475728 C22orf24Q9Y442 160 aa8.93□□□□□ -0.98
ABCF3-211ENST00000475728 ATP6V1G1O75348 118 aa8.92□□□□□ -0.98
ABCF3-211ENST00000475728 IGKCP01834 107 aa8.92□□□□□ -0.98
ABCF3-211ENST00000475728 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
ABCF3-211ENST00000475728 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
ABCF3-211ENST00000475728 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
ABCF3-211ENST00000475728 NKAPP1Q8N9T2 125 aa8.91□□□□□ -0.98
ABCF3-211ENST00000475728 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
ABCF3-211ENST00000475728 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
ABCF3-211ENST00000475728 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
ABCF3-211ENST00000475728 LEPROTO15243 131 aa8.9□□□□□ -0.98
ABCF3-211ENST00000475728 LINC00158P58513 81 aa8.9□□□□□ -0.98
ABCF3-211ENST00000475728 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms