RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 Q6ZRU5 148 aa9.83□□□□□ -0.84
MCF2L-224ENST00000475524 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
MCF2L-224ENST00000475524 STPG4Q8N801 248 aa9.83□□□□□ -0.84
MCF2L-224ENST00000475524 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-224ENST00000475524 DNAH2Q9P225 4427 aa9.83□□□□□ -0.84
MCF2L-224ENST00000475524 LGALS3P17931 250 aaKnown RBP9.82□□□□□ -0.84
MCF2L-224ENST00000475524 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
MCF2L-224ENST00000475524 PYY3Q5JQD4 70 aa9.82□□□□□ -0.84
MCF2L-224ENST00000475524 C2orf82Q6UX34 121 aa9.82□□□□□ -0.84
MCF2L-224ENST00000475524 DNAH17Q9UFH2 4485 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 FRAS1Q86XX4 4008 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 MYMXA0A1B0GTQ4 84 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 NDUFA12Q9UI09 145 aa9.81□□□□□ -0.84
MCF2L-224ENST00000475524 LINC00587B1AMM8 73 aa9.8□□□□□ -0.84
MCF2L-224ENST00000475524 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
MCF2L-224ENST00000475524 ANKRD39Q53RE8 183 aa9.8□□□□□ -0.84
MCF2L-224ENST00000475524 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
MCF2L-224ENST00000475524 C6orf48Q9UBA6 75 aa9.8□□□□□ -0.84
MCF2L-224ENST00000475524 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
MCF2L-224ENST00000475524 COX17Q14061 63 aa9.79□□□□□ -0.84
MCF2L-224ENST00000475524 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
MCF2L-224ENST00000475524 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
MCF2L-224ENST00000475524 LOC105371267A0A1B0GV96 52 aa9.78□□□□□ -0.84
MCF2L-224ENST00000475524 GCSHP23434 173 aa9.78□□□□□ -0.84
MCF2L-224ENST00000475524 VAMP8Q9BV40 100 aa9.78□□□□□ -0.84
MCF2L-224ENST00000475524 NDUFC2-KCTD14E9PQ53 114 aa9.76□□□□□ -0.85
MCF2L-224ENST00000475524 SMIM6P0DI80 62 aa9.76□□□□□ -0.85
MCF2L-224ENST00000475524 MAJINQ3KP22 176 aa9.76□□□□□ -0.85
MCF2L-224ENST00000475524 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
MCF2L-224ENST00000475524 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
MCF2L-224ENST00000475524 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
MCF2L-224ENST00000475524 RYR3Q15413 4870 aa9.74□□□□□ -0.85
MCF2L-224ENST00000475524 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
MCF2L-224ENST00000475524 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
MCF2L-224ENST00000475524 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
MCF2L-224ENST00000475524 TIMM17BO60830 172 aa9.73□□□□□ -0.85
MCF2L-224ENST00000475524 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
MCF2L-224ENST00000475524 DLEU1O43261 78 aa9.72□□□□□ -0.85
MCF2L-224ENST00000475524 S100A12P80511 92 aa9.72□□□□□ -0.85
MCF2L-224ENST00000475524 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
MCF2L-224ENST00000475524 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
MCF2L-224ENST00000475524 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-224ENST00000475524 PAM16Q9Y3D7 125 aa9.72□□□□□ -0.85
MCF2L-224ENST00000475524 COX8AP10176 69 aa9.71□□□□□ -0.86
MCF2L-224ENST00000475524 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
MCF2L-224ENST00000475524 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.86
MCF2L-224ENST00000475524 Q6ZSA8 131 aa9.71□□□□□ -0.86
MCF2L-224ENST00000475524 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
MCF2L-224ENST00000475524 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
MCF2L-224ENST00000475524 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
MCF2L-224ENST00000475524 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
MCF2L-224ENST00000475524 Q6ZRP5 223 aa9.7□□□□□ -0.86
MCF2L-224ENST00000475524 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
MCF2L-224ENST00000475524 A0A096LNI7 61 aa9.69□□□□□ -0.86
MCF2L-224ENST00000475524 PFN2P35080 140 aa9.69□□□□□ -0.86
MCF2L-224ENST00000475524 PKD1P98161 4303 aa9.69□□□□□ -0.86
MCF2L-224ENST00000475524 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
MCF2L-224ENST00000475524 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
MCF2L-224ENST00000475524 LINC00158P58513 81 aa9.68□□□□□ -0.86
MCF2L-224ENST00000475524 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
MCF2L-224ENST00000475524 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
MCF2L-224ENST00000475524 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
MCF2L-224ENST00000475524 SMIM13P0DJ93 91 aa9.67□□□□□ -0.86
MCF2L-224ENST00000475524 GAGE2BQ13066 116 aa9.67□□□□□ -0.86
MCF2L-224ENST00000475524 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 SLC25A34Q6PIV7 304 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 Q6ZVH6 145 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 LITAFQ99732 161 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
MCF2L-224ENST00000475524 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
MCF2L-224ENST00000475524 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
MCF2L-224ENST00000475524 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
MCF2L-224ENST00000475524 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
MCF2L-224ENST00000475524 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
MCF2L-224ENST00000475524 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-224ENST00000475524 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
MCF2L-224ENST00000475524 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
MCF2L-224ENST00000475524 SPANXDQ9BXN6 97 aa9.64□□□□□ -0.87
MCF2L-224ENST00000475524 SPANXB1Q9NS25 103 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-224ENST00000475524 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
MCF2L-224ENST00000475524 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
MCF2L-224ENST00000475524 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
MCF2L-224ENST00000475524 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
MCF2L-224ENST00000475524 C14orf144Q96I85 54 aa9.63□□□□□ -0.87
MCF2L-224ENST00000475524 HIGD1BQ9P298 99 aa9.63□□□□□ -0.87
MCF2L-224ENST00000475524 IFITM1P13164 125 aa9.62□□□□□ -0.87
MCF2L-224ENST00000475524 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
MCF2L-224ENST00000475524 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
MCF2L-224ENST00000475524 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
MCF2L-224ENST00000475524 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
MCF2L-224ENST00000475524 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
MCF2L-224ENST00000475524 PANO1I0J062 215 aa9.61□□□□□ -0.87
MCF2L-224ENST00000475524 CDK2AP2O75956 126 aa9.61□□□□□ -0.87
MCF2L-224ENST00000475524 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
MCF2L-224ENST00000475524 MIEN1Q9BRT3 115 aa9.61□□□□□ -0.87
MCF2L-224ENST00000475524 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms