RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
RPUSD3-214ENST00000473522 SCO1O75880 301 aa11.13□□□□□ -0.63
RPUSD3-214ENST00000473522 PRSS2P07478 247 aa11.13□□□□□ -0.63
RPUSD3-214ENST00000473522 HSBP1O75506 76 aa11.12□□□□□ -0.63
RPUSD3-214ENST00000473522 NDUFA6P56556 154 aa11.12□□□□□ -0.63
RPUSD3-214ENST00000473522 LINC00310P59036 64 aa11.12□□□□□ -0.63
RPUSD3-214ENST00000473522 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
RPUSD3-214ENST00000473522 CKS1BP61024 79 aa11.11□□□□□ -0.63
RPUSD3-214ENST00000473522 Q6ZRP5 223 aa11.11□□□□□ -0.63
RPUSD3-214ENST00000473522 TRAV12-1A0A0B4J245 112 aa11.1□□□□□ -0.63
RPUSD3-214ENST00000473522 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
RPUSD3-214ENST00000473522 RPL37AP61513 92 aaKnown RBP11.1□□□□□ -0.63
RPUSD3-214ENST00000473522 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
RPUSD3-214ENST00000473522 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
RPUSD3-214ENST00000473522 H3BRM9 83 aa11.09□□□□□ -0.63
RPUSD3-214ENST00000473522 SERF1AO75920 110 aa11.09□□□□□ -0.63
RPUSD3-214ENST00000473522 CXCL5P42830 114 aa11.09□□□□□ -0.63
RPUSD3-214ENST00000473522 RPL18AQ02543 176 aaKnown RBP11.09□□□□□ -0.63
RPUSD3-214ENST00000473522 IGLV5-39A0A0G2JS06 123 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 F8VRH5 84 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 NUPR1O60356 82 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 ZNF22P17026 224 aaPredicted RBP11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 COX7B2Q8TF08 81 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
RPUSD3-214ENST00000473522 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
RPUSD3-214ENST00000473522 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
RPUSD3-214ENST00000473522 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
RPUSD3-214ENST00000473522 C11orf86A6NJI1 115 aa11.06□□□□□ -0.64
RPUSD3-214ENST00000473522 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
RPUSD3-214ENST00000473522 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
RPUSD3-214ENST00000473522 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
RPUSD3-214ENST00000473522 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
RPUSD3-214ENST00000473522 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
RPUSD3-214ENST00000473522 TMEM170BQ5T4T1 132 aa11.01□□□□□ -0.65
RPUSD3-214ENST00000473522 KRTAP7-1Q8IUC3 87 aa11.01□□□□□ -0.65
RPUSD3-214ENST00000473522 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
RPUSD3-214ENST00000473522 FLG2Q5D862 2391 aaPredicted RBP11□□□□□ -0.65
RPUSD3-214ENST00000473522 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
RPUSD3-214ENST00000473522 FAM168BA1KXE4 195 aa10.99□□□□□ -0.65
RPUSD3-214ENST00000473522 S100A1P23297 94 aa10.99□□□□□ -0.65
RPUSD3-214ENST00000473522 ODF1Q14990 250 aa10.99□□□□□ -0.65
RPUSD3-214ENST00000473522 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
RPUSD3-214ENST00000473522 KRTAP29-1A8MX34 341 aaPredicted RBP10.97□□□□□ -0.65
RPUSD3-214ENST00000473522 FABP4P15090 132 aa10.97□□□□□ -0.65
RPUSD3-214ENST00000473522 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
RPUSD3-214ENST00000473522 LRP1Q07954 4544 aaKnown RBP10.96□□□□□ -0.66
RPUSD3-214ENST00000473522 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
RPUSD3-214ENST00000473522 SFTA2Q6UW10 78 aa10.95□□□□□ -0.66
RPUSD3-214ENST00000473522 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
RPUSD3-214ENST00000473522 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
RPUSD3-214ENST00000473522 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPUSD3-214ENST00000473522 OXTP01178 125 aa10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 COX17Q14061 63 aa10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 FAM19A5Q7Z5A7 132 aaPredicted RBP10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 FAT3Q8TDW7 4589 aa10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 HERC1Q15751 4861 aa10.93□□□□□ -0.66
RPUSD3-214ENST00000473522 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
RPUSD3-214ENST00000473522 H0Y8G0 127 aa10.92□□□□□ -0.66
RPUSD3-214ENST00000473522 SERTAD4-AS1Q5TG53 156 aa10.92□□□□□ -0.66
RPUSD3-214ENST00000473522 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
RPUSD3-214ENST00000473522 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
RPUSD3-214ENST00000473522 ATP6V1G1O75348 118 aa10.91□□□□□ -0.66
RPUSD3-214ENST00000473522 PLNP26678 52 aa10.91□□□□□ -0.66
RPUSD3-214ENST00000473522 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
RPUSD3-214ENST00000473522 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
RPUSD3-214ENST00000473522 C22orf24Q9Y442 160 aa10.91□□□□□ -0.66
RPUSD3-214ENST00000473522 M0QXV9 152 aa10.9□□□□□ -0.66
RPUSD3-214ENST00000473522 DPM2O94777 84 aa10.89□□□□□ -0.67
RPUSD3-214ENST00000473522 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
RPUSD3-214ENST00000473522 TP73-AS1Q9UF72 201 aa10.89□□□□□ -0.67
RPUSD3-214ENST00000473522 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
RPUSD3-214ENST00000473522 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
RPUSD3-214ENST00000473522 PFN2P35080 140 aa10.88□□□□□ -0.67
RPUSD3-214ENST00000473522 IGKCP01834 107 aa10.87□□□□□ -0.67
RPUSD3-214ENST00000473522 LBHQ53QV2 105 aaPredicted RBP10.87□□□□□ -0.67
RPUSD3-214ENST00000473522 PMCHL2Q9BQD1 86 aa10.87□□□□□ -0.67
RPUSD3-214ENST00000473522 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
RPUSD3-214ENST00000473522 J3QL48 77 aa10.85□□□□□ -0.67
RPUSD3-214ENST00000473522 LEPROTO15243 131 aa10.85□□□□□ -0.67
RPUSD3-214ENST00000473522 HERV-K104P63124 156 aa10.85□□□□□ -0.67
RPUSD3-214ENST00000473522 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
RPUSD3-214ENST00000473522 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
RPUSD3-214ENST00000473522 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
RPUSD3-214ENST00000473522 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
RPUSD3-214ENST00000473522 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
RPUSD3-214ENST00000473522 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms