RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LOC107984640A0A0U1RRK4 108 aa12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 XGP55808 180 aa12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 C10orf25Q5T742 122 aa12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 C6orf48Q9UBA6 75 aa12.16□□□□□ -0.46
CTDSP1-207ENST00000473420 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
CTDSP1-207ENST00000473420 DPM2O94777 84 aa12.15□□□□□ -0.46
CTDSP1-207ENST00000473420 PET117Q6UWS5 81 aa12.15□□□□□ -0.46
CTDSP1-207ENST00000473420 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
CTDSP1-207ENST00000473420 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
CTDSP1-207ENST00000473420 DNAH8Q96JB1 4490 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 IGKCP01834 107 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 TLX1NBP0CAT3 122 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 LINC01545Q5VT33 79 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 LINC00474Q9P2X8 69 aa12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.13□□□□□ -0.47
CTDSP1-207ENST00000473420 A0A096LNI7 61 aa12.12□□□□□ -0.47
CTDSP1-207ENST00000473420 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
CTDSP1-207ENST00000473420 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
CTDSP1-207ENST00000473420 RYR1P21817 5038 aa12.11□□□□□ -0.47
CTDSP1-207ENST00000473420 PANO1I0J062 215 aa12.11□□□□□ -0.47
CTDSP1-207ENST00000473420 S100A2P29034 98 aa12.11□□□□□ -0.47
CTDSP1-207ENST00000473420 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
CTDSP1-207ENST00000473420 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
CTDSP1-207ENST00000473420 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
CTDSP1-207ENST00000473420 CHTF8P0CG12 524 aa12.09□□□□□ -0.47
CTDSP1-207ENST00000473420 KRTDAPP60985 99 aa12.09□□□□□ -0.47
CTDSP1-207ENST00000473420 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-207ENST00000473420 CIRBP-AS1Q8TBR5 109 aa12.09□□□□□ -0.47
CTDSP1-207ENST00000473420 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
CTDSP1-207ENST00000473420 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
CTDSP1-207ENST00000473420 C5orf52A6NGY3 159 aa12.08□□□□□ -0.48
CTDSP1-207ENST00000473420 NDUFC2-KCTD14E9PQ53 114 aa12.08□□□□□ -0.48
CTDSP1-207ENST00000473420 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-207ENST00000473420 HERVK_113P61574 105 aa12.07□□□□□ -0.48
CTDSP1-207ENST00000473420 HAMPP81172 84 aa12.07□□□□□ -0.48
CTDSP1-207ENST00000473420 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
CTDSP1-207ENST00000473420 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
CTDSP1-207ENST00000473420 C20orf202A1L168 122 aa12.06□□□□□ -0.48
CTDSP1-207ENST00000473420 C9orf116Q5BN46 136 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-207ENST00000473420 Q6ZRP5 223 aa12.06□□□□□ -0.48
CTDSP1-207ENST00000473420 AKR1D1P51857 326 aa12.05□□□□□ -0.48
CTDSP1-207ENST00000473420 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
CTDSP1-207ENST00000473420 PLAC8Q9NZF1 115 aa12.05□□□□□ -0.48
CTDSP1-207ENST00000473420 A0A087WYN8 130 aa12.04□□□□□ -0.48
CTDSP1-207ENST00000473420 LEPROTO15243 131 aa12.04□□□□□ -0.48
CTDSP1-207ENST00000473420 PLEKHB2Q96CS7 222 aa12.04□□□□□ -0.48
CTDSP1-207ENST00000473420 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
CTDSP1-207ENST00000473420 STPG4Q8N801 248 aa12.03□□□□□ -0.48
CTDSP1-207ENST00000473420 HSPG2P98160 4391 aa12.02□□□□□ -0.49
CTDSP1-207ENST00000473420 HERC2O95714 4834 aa12.01□□□□□ -0.49
CTDSP1-207ENST00000473420 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
CTDSP1-207ENST00000473420 Q8N1X5 172 aa12.01□□□□□ -0.49
CTDSP1-207ENST00000473420 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
CTDSP1-207ENST00000473420 EPM2AB3EWF7 344 aa12□□□□□ -0.49
CTDSP1-207ENST00000473420 E9PLD3 99 aa12□□□□□ -0.49
CTDSP1-207ENST00000473420 HERV-K104P63124 156 aa12□□□□□ -0.49
CTDSP1-207ENST00000473420 COX17Q14061 63 aa12□□□□□ -0.49
CTDSP1-207ENST00000473420 J3QQQ9 107 aa11.99□□□□□ -0.49
CTDSP1-207ENST00000473420 NDUFA12Q9UI09 145 aa11.99□□□□□ -0.49
CTDSP1-207ENST00000473420 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
CTDSP1-207ENST00000473420 MYMXA0A1B0GTQ4 84 aa11.98□□□□□ -0.49
CTDSP1-207ENST00000473420 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
CTDSP1-207ENST00000473420 NMUP48645 174 aa11.98□□□□□ -0.49
CTDSP1-207ENST00000473420 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
CTDSP1-207ENST00000473420 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
CTDSP1-207ENST00000473420 C9orf129Q5T035 196 aaKnown RBP11.96□□□□□ -0.49
CTDSP1-207ENST00000473420 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
CTDSP1-207ENST00000473420 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
CTDSP1-207ENST00000473420 LINC00587B1AMM8 73 aa11.95□□□□□ -0.5
CTDSP1-207ENST00000473420 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
CTDSP1-207ENST00000473420 PFN2P35080 140 aa11.95□□□□□ -0.5
CTDSP1-207ENST00000473420 KRTAP17-1Q9BYP8 105 aa11.95□□□□□ -0.5
CTDSP1-207ENST00000473420 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
CTDSP1-207ENST00000473420 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
CTDSP1-207ENST00000473420 Q5VSD8 79 aa11.92□□□□□ -0.5
CTDSP1-207ENST00000473420 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
CTDSP1-207ENST00000473420 ATOH7Q8N100 152 aa11.91□□□□□ -0.5
CTDSP1-207ENST00000473420 C7orf33Q8WU49 177 aa11.91□□□□□ -0.5
CTDSP1-207ENST00000473420 LINC00158P58513 81 aa11.9□□□□□ -0.5
CTDSP1-207ENST00000473420 FAM19A5Q7Z5A7 132 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-207ENST00000473420 PLA2G2DQ9UNK4 145 aa11.9□□□□□ -0.5
CTDSP1-207ENST00000473420 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-207ENST00000473420 IGKV2D-26A0A0A0MRZ7 120 aa11.89□□□□□ -0.51
CTDSP1-207ENST00000473420 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-207ENST00000473420 SMIM13P0DJ93 91 aa11.89□□□□□ -0.51
CTDSP1-207ENST00000473420 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
CTDSP1-207ENST00000473420 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
CTDSP1-207ENST00000473420 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
CTDSP1-207ENST00000473420 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
CTDSP1-207ENST00000473420 M0QXV9 152 aa11.86□□□□□ -0.51
CTDSP1-207ENST00000473420 RPL37AP61513 92 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-207ENST00000473420 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
CTDSP1-207ENST00000473420 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 A0A0J9YXY3 114 aa11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 A0A0U1RRA0 63 aa11.85□□□□□ -0.51
CTDSP1-207ENST00000473420 HSBP1L1C9JCN9 74 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms