RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 CXCL5P42830 114 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
SNX13-205ENST00000471744 CKS1BP61024 79 aa9.66□□□□□ -0.86
SNX13-205ENST00000471744 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
SNX13-205ENST00000471744 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
SNX13-205ENST00000471744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
SNX13-205ENST00000471744 F8VRH5 84 aa9.65□□□□□ -0.86
SNX13-205ENST00000471744 NUPR1O60356 82 aa9.65□□□□□ -0.86
SNX13-205ENST00000471744 HAMPP81172 84 aa9.65□□□□□ -0.86
SNX13-205ENST00000471744 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
SNX13-205ENST00000471744 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
SNX13-205ENST00000471744 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
SNX13-205ENST00000471744 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
SNX13-205ENST00000471744 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
SNX13-205ENST00000471744 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
SNX13-205ENST00000471744 HSPG2P98160 4391 aa9.64□□□□□ -0.87
SNX13-205ENST00000471744 DNAH8Q96JB1 4490 aa9.64□□□□□ -0.87
SNX13-205ENST00000471744 A0A096LNI7 61 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 IGKV2-24A0A0C4DH68 120 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 MAJINQ3KP22 176 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 COA6Q5JTJ3 125 aaKnown RBP9.63□□□□□ -0.87
SNX13-205ENST00000471744 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
SNX13-205ENST00000471744 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
SNX13-205ENST00000471744 PANO1I0J062 215 aa9.62□□□□□ -0.87
SNX13-205ENST00000471744 FABP4P15090 132 aa9.62□□□□□ -0.87
SNX13-205ENST00000471744 A0A087WYN8 130 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SNX13-205ENST00000471744 RPL18AQ02543 176 aaKnown RBP9.61□□□□□ -0.87
SNX13-205ENST00000471744 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 ODF1Q14990 250 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
SNX13-205ENST00000471744 H0Y8G0 127 aa9.6□□□□□ -0.87
SNX13-205ENST00000471744 PLNP26678 52 aa9.59□□□□□ -0.87
SNX13-205ENST00000471744 Q5VSD8 79 aa9.59□□□□□ -0.87
SNX13-205ENST00000471744 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
SNX13-205ENST00000471744 STPG4Q8N801 248 aa9.59□□□□□ -0.87
SNX13-205ENST00000471744 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
SNX13-205ENST00000471744 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
SNX13-205ENST00000471744 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
SNX13-205ENST00000471744 DPM2O94777 84 aa9.56□□□□□ -0.88
SNX13-205ENST00000471744 Q6ZRP5 223 aa9.56□□□□□ -0.88
SNX13-205ENST00000471744 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
SNX13-205ENST00000471744 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
SNX13-205ENST00000471744 SYS1-DBNDD2H3BUS1 97 aa9.54□□□□□ -0.88
SNX13-205ENST00000471744 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
SNX13-205ENST00000471744 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
SNX13-205ENST00000471744 IGKCP01834 107 aa9.53□□□□□ -0.88
SNX13-205ENST00000471744 HERVK_113P61574 105 aa9.53□□□□□ -0.88
SNX13-205ENST00000471744 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
SNX13-205ENST00000471744 KRTAP4-5Q9BYR2 181 aa9.52□□□□□ -0.89
SNX13-205ENST00000471744 S100A6P06703 90 aa9.51□□□□□ -0.89
SNX13-205ENST00000471744 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
SNX13-205ENST00000471744 COX17Q14061 63 aa9.5□□□□□ -0.89
SNX13-205ENST00000471744 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
SNX13-205ENST00000471744 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
SNX13-205ENST00000471744 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
SNX13-205ENST00000471744 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
SNX13-205ENST00000471744 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
SNX13-205ENST00000471744 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
SNX13-205ENST00000471744 ABCA13Q86UQ4 5058 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 C20orf202A1L168 122 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 LEPROTO15243 131 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 S100A2P29034 98 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 AKR1D1P51857 326 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 KRTDAPP60985 99 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 HERV-K104P63124 156 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
SNX13-205ENST00000471744 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
SNX13-205ENST00000471744 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
SNX13-205ENST00000471744 FAT1Q14517 4588 aa9.46□□□□□ -0.89
SNX13-205ENST00000471744 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
SNX13-205ENST00000471744 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.9
SNX13-205ENST00000471744 PFN2P35080 140 aa9.46□□□□□ -0.9
SNX13-205ENST00000471744 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
SNX13-205ENST00000471744 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
SNX13-205ENST00000471744 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
SNX13-205ENST00000471744 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
SNX13-205ENST00000471744 J3QQQ9 107 aa9.45□□□□□ -0.9
SNX13-205ENST00000471744 NMUP48645 174 aa9.45□□□□□ -0.9
SNX13-205ENST00000471744 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
SNX13-205ENST00000471744 M0QXV9 152 aa9.44□□□□□ -0.9
SNX13-205ENST00000471744 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
SNX13-205ENST00000471744 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
SNX13-205ENST00000471744 E9PLD3 99 aa9.43□□□□□ -0.9
SNX13-205ENST00000471744 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
SNX13-205ENST00000471744 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
SNX13-205ENST00000471744 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms